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org.biojava.nbio.ontology.Synonym Maven / Gradle / Ivy
/*
* BioJava development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public Licence. This should
* be distributed with the code. If you do not have a copy,
* see:
*
* http://www.gnu.org/copyleft/lesser.html
*
* Copyright for this code is held jointly by the individual
* authors. These should be listed in @author doc comments.
*
* For more information on the BioJava project and its aims,
* or to join the biojava-l mailing list, visit the home page
* at:
*
* http://www.biojava.org/
*
* Created on Jan 24, 2008
*
*/
package org.biojava.nbio.ontology;
import java.util.Comparator;
public class Synonym implements Comparable{
public final static int UNKNOWN_SCOPE = -1;
public final static int RELATED_SYNONYM = 0;
public final static int EXACT_SYNONYM = 1;
public final static int NARROW_SYNONYM = 2;
public final static int BROAD_SYNONYM = 3;
int scope;
String category;
String name;
@Override
public String toString(){
String txt = "Synonym: name:"+name+ " category:" + category + " scope: " +scope;
return txt;
}
public final static Comparator COMPARATOR = new Comparator() {
@Override
public int compare(Synonym a, Synonym b) {
if (a == null && b == null)
return 0;
else if (a == null)
return -1;
else if (b == null)
return 1;
else {
if ((a.getCategory() == null) && (b.getCategory() == null))
return 0;
else if ( a.getCategory()==null)
return -1;
else if ( b.getCategory()==null)
return 1;
return a.getCategory().compareToIgnoreCase(
b.getCategory());
}
}
};
public Synonym() {
}
public String getName() {
return name;
}
public void setName(String name) {
this.name = name;
}
public String getCategory() {
return category;
}
public void setCategory(String category) {
this.category = category;
}
public int getScope() {
return scope;
}
public void setScope(int scope) {
this.scope = scope;
}
@Override
public int compareTo(Synonym o) {
return COMPARATOR.compare(this, o);
}
}
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