org.biojava.nbio.structure.align.helper.AligMatEl Maven / Gradle / Ivy

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/*
 *                  BioJava development code
 *
 * This code may be freely distributed and modified under the
 * terms of the GNU Lesser General Public Licence.  This should
 * be distributed with the code.  If you do not have a copy,
 * see:
 *
 *      http://www.gnu.org/copyleft/lesser.html
 *
 * Copyright for this code is held jointly by the individual
 * authors.  These should be listed in @author doc comments.
 *
 * For more information on the BioJava project and its aims,
 * or to join the biojava-l mailing list, visit the home page
 * at:
 *
 *      http://www.biojava.org/
 *
 * Created on Mar 1, 2006
 *
 */
package org.biojava.nbio.structure.align.helper;

public class AligMatEl
extends IndexPair{



		/**
	 *
	 */
	private static final long serialVersionUID = -4040926588803887471L;
		int value;
		int contig;


		public AligMatEl(){
			super();
			value  = -1;
			contig = -1;
		}

		public int getContig() {
			return contig;
		}
		public void setContig(int contig) {
			this.contig = contig;
		}

		public int getValue() {
			return value;
		}
		public void setValue(int value) {
			this.value = value;
		}

		@Override
		public String toString(){
			String ret = "AligMatEl val:" + value + " contig:" + contig +
			" trackrow:" + getRow() + " trackcol:" + getCol();
			return ret;
		}

	}