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The protein structure modules of BioJava.

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/**
 *                    BioJava development code
 *
 * This code may be freely distributed and modified under the
 * terms of the GNU Lesser General Public Licence.  This should
 * be distributed with the code.  If you do not have a copy,
 * see:
 *
 *      http://www.gnu.org/copyleft/lesser.html
 *
 * Copyright for this code is held jointly by the individual
 * authors.  These should be listed in @author doc comments.
 *
 * For more information on the BioJava project and its aims,
 * or to join the biojava-l mailing list, visit the home page
 * at:
 *
 *      http://www.biojava.org/
 *
 * Created on Oct 10, 2011
 * Created by Andreas Prlic
 *
 * @since 3.0.2
 */
package org.biojava.nbio.structure.align.xml;

import org.biojava.nbio.structure.align.client.PdbPair;

import java.io.StringWriter;
import java.util.SortedSet;
import java.util.TreeSet;

public class PdbPairsMessage {

	String method ;

	SortedSet pairs;

	public PdbPairsMessage(){

		method = PdbPairXMLConverter.DEFAULT_METHOD_NAME;

		pairs = new TreeSet<>();

	}

	public String getMethod() {
		return method;
	}
	public void setMethod(String method) {
		this.method = method;
	}
	public SortedSet getPairs() {
		return pairs;
	}
	public void setPairs(SortedSet pairs) {
		this.pairs = pairs;
	}


	@Override
	public String toString(){

		StringWriter w = new StringWriter();

		w.append("PdbPairsMessage: ");
		w.append("algorithm: ");
		w.append(method);
		w.append(" pairs: ");
		w.append(pairs.toString());


		return w.toString();

	}



}