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The protein structure modules of BioJava.

There is a newer version: 7.1.3

/*
 *                    PDB web development code
 *
 * This code may be freely distributed and modified under the
 * terms of the GNU Lesser General Public Licence.  This should
 * be distributed with the code.  If you do not have a copy,
 * see:
 *
 *      http://www.gnu.org/copyleft/lesser.html
 *
 * Copyright for this code is held jointly by the individual
 * authors.  These should be listed in @author doc comments.
 *
 *
 * Created on Aug 5, 2009
 * Created by ap3
 *
 */
package org.biojava.nbio.structure.secstruc;

import java.io.Serializable;

/**
 * Container that represents a hidrogen bond. It contains the energy of the bond
 * in cal/mol and the partner index.
 *
 * @author Andreas Prlic
 * @author Aleix Lafita
 *
 */
public class HBond implements Serializable {

	private static final long serialVersionUID = 8246764841329431337L;

	private double energy;
	private int partner;

	public HBond() {
		energy = 0;
		partner = 0;
	}

	public HBond(HBond o) {
		this.energy = o.energy;
		this.partner = o.partner;
	}

	@Override
	public HBond clone() {
		return new HBond(this);
	}

	@Override
	public String toString() {
		return partner + " | " + (energy / 1000.0);
	}

	public double getEnergy() {
		return energy;
	}

	public void setEnergy(double energy) {
		this.energy = energy;
	}

	public int getPartner() {
		return partner;
	}

	public void setPartner(int partner) {
		this.partner = partner;
	}

}