org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler Maven / Gradle / Ivy
/*
* BioJava development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public Licence. This should
* be distributed with the code. If you do not have a copy,
* see:
*
* http://www.gnu.org/copyleft/lesser.html
*
* Copyright for this code is held jointly by the individual
* authors. These should be listed in @author doc comments.
*
* For more information on the BioJava project and its aims,
* or to join the biojava-l mailing list, visit the home page
* at:
*
* http://www.biojava.org/
*
*/
package org.biojava.bio.program.ssbind;
import java.util.ArrayList;
import java.util.List;
import org.biojava.bio.program.xff.ElementRecognizer;
import org.biojava.utils.stax.DelegationManager;
import org.biojava.utils.stax.StAXContentHandler;
import org.biojava.utils.stax.StAXContentHandlerBase;
import org.xml.sax.Attributes;
import org.xml.sax.SAXException;
/**
* SeqSimilarityStAXHandler
is a base class for creating
* modular StAX handlers which send callbacks to a
* SeqSimilarityStAXAdapter
.
*
* @author Keith James
* @since 1.3
*/
public class SeqSimilarityStAXHandler extends StAXContentHandlerBase
{
// Available handler bindings
private List bindings;
// Incremented on startElement, decremented on endElement. Used to
// identify which method calls to handle here and which to
// delegate.
private int depth;
// The target handler
protected SeqSimilarityStAXAdapter ssContext;
/**
* Creates a new SeqSimilarityStAXHandler
which
* simply maintains a list of StAXHandlerBinding
s and
* delegates to any suitable StAXContentHandler
bound
* by one of them.
*/
public SeqSimilarityStAXHandler(SeqSimilarityStAXAdapter ssContext)
{
this.ssContext = ssContext;
bindings = new ArrayList();
}
public void startElement(String nsURI,
String localName,
String qName,
Attributes attrs,
DelegationManager dm)
throws SAXException
{
depth++;
if (depth == 1)
{
handleStartElement(nsURI, localName, qName, attrs);
}
else
{
for (int i = bindings.size(); --i >= 0;)
{
StAXHandlerBinding b = (StAXHandlerBinding) bindings.get(i);
if (b.recognizer.filterStartElement(nsURI, localName, qName, attrs))
{
dm.delegate(b.factory.getHandler(ssContext));
return;
}
}
}
}
public void endElement(String nsURI,
String localName,
String qName,
StAXContentHandler handler)
throws SAXException
{
depth--;
if (depth == 0)
{
handleEndElement(nsURI, localName, qName);
}
}
protected void addHandler(ElementRecognizer recognizer,
StAXHandlerFactory factory)
{
bindings.add(new StAXHandlerBinding(recognizer, factory));
}
protected void handleStartElement(String nsURI,
String localName,
String qName,
Attributes attrs)
throws SAXException { }
protected void handleEndElement(String nsURI,
String localName,
String qName)
throws SAXException { }
}