
org.biojavax.SimpleRankedCrossRef Maven / Gradle / Ivy
/*
* BioJava development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public Licence. This should
* be distributed with the code. If you do not have a copy,
* see:
*
* http://www.gnu.org/copyleft/lesser.html
*
* Copyright for this code is held jointly by the individual
* authors. These should be listed in @author doc comments.
*
* For more information on the BioJava project and its aims,
* or to join the biojava-l mailing list, visit the home page
* at:
*
* http://www.biojava.org/
*
*/
package org.biojavax;
import org.biojava.utils.AbstractChangeable;
import org.biojava.utils.ChangeEvent;
import org.biojava.utils.ChangeSupport;
import org.biojava.utils.ChangeVetoException;
/**
* Simple implementation of RankedCrossRef.
* @author Richard Holland
* @author gwaldon
* @since 1.5
*/
public class SimpleRankedCrossRef extends AbstractChangeable implements RankedCrossRef {
private CrossRef crossref;
private int rank;
/**
* Constructs a new crossref with a rank.
* @param crossref the crossref to rank. Must not be null.
* @param rank the rank to give it.
*/
public SimpleRankedCrossRef(CrossRef crossref, int rank) {
if (crossref==null) throw new IllegalArgumentException("Cross reference cannot be null");
this.crossref = crossref;
this.rank = rank;
}
// Hibernate requirement - not for public use.
protected SimpleRankedCrossRef() {}
// Hibernate requirement - not for public use.
void setCrossRef(CrossRef crossref) { this.crossref = crossref; }
/**
* {@inheritDoc}
*/
public CrossRef getCrossRef() { return this.crossref; }
/**
* {@inheritDoc}
*/
public void setRank(int rank) throws ChangeVetoException {
if(rank==this.rank)
return;
if(!this.hasListeners(RankedCrossRef.RANK)) {
this.rank = rank;
} else {
ChangeEvent ce = new ChangeEvent(
this,
RankedCrossRef.RANK,
new Integer(rank),
new Integer(this.rank)
);
ChangeSupport cs = this.getChangeSupport(RankedCrossRef.RANK);
synchronized(cs) {
cs.firePreChangeEvent(ce);
this.rank = rank;
cs.firePostChangeEvent(ce);
}
}
}
/**
* {@inheritDoc}
*/
public int getRank() { return this.rank; }
/**
* {@inheritDoc}
* Ranked cross references are the same if they have the same rank and
* refer to the same cross reference (cross references are equal).
*/
public boolean equals(Object obj) {
if (this == obj) return true;
if (obj==null || !(obj instanceof RankedCrossRef)) return false;
// Hibernate comparison - we haven't been populated yet
if (this.crossref==null) return false;
// Normal comparison
RankedCrossRef them = (RankedCrossRef)obj;
return (this.rank==them.getRank() &&
this.crossref.equals(them.getCrossRef()));
}
/**
* {@inheritDoc}
* Ranked cross references are sorted first by rank, then by cross reference.
*/
public int compareTo(Object o) {
if (o==this) return 0;
// Hibernate comparison - we haven't been populated yet
if (this.crossref==null) return -1;
// Normal comparison
RankedCrossRef them = (RankedCrossRef)o;
if (this.rank!=them.getRank()) return this.rank - them.getRank();
return this.crossref.compareTo(them.getCrossRef());
}
/**
* {@inheritDoc}
*/
public int hashCode() {
int code = 17;
// Hibernate comparison - we haven't been populated yet
if (this.crossref==null) return code;
// Normal comparison
code = 37*code + this.crossref.hashCode();
code = 37*code + this.rank;
return code;
}
/**
* {@inheritDoc}
* Form: "(#rank) crossref"
*/
public String toString() {
return "(#"+this.rank+") "+this.crossref;
}
}
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