org.biojavax.bio.phylo.io.nexus.TreesBlockBuilder Maven / Gradle / Ivy
/*
* BioJava development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public Licence. This should
* be distributed with the code. If you do not have a copy,
* see:
*
* http://www.gnu.org/copyleft/lesser.html
*
* Copyright for this code is held jointly by the individual
* authors. These should be listed in @author doc comments.
*
* For more information on the BioJava project and its aims,
* or to join the biojava-l mailing list, visit the home page
* at:
*
* http://www.biojava.org/
*
*/
package org.biojavax.bio.phylo.io.nexus;
import org.biojavax.bio.phylo.io.nexus.TreesBlock.NewickTreeString;
/**
* Builds Nexus taxa blocks.
*
* @author Richard Holland
* @author Tobias Thierer
* @author Jim Balhoff
* @since 1.6
*/
public class TreesBlockBuilder extends NexusBlockBuilder.Abstract implements
TreesBlockListener {
private TreesBlock block;
protected void addComment(final NexusComment comment) {
this.block.addComment(comment);
}
protected NexusBlock startBlockObject() {
this.block = new TreesBlock();
this.resetStatus();
return this.block;
}
private void resetStatus() {
// Nothing to do.
}
public void endBlock() {
// Don't care.
}
public void endTokenGroup() {
// Nothing to do.
}
public void addTranslation(String label, String taxa) {
this.block.addTranslation(label, taxa);
}
public void addTree(String label, NewickTreeString tree) {
this.block.addTree(label, tree);
}
}
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