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The Bouncy Castle Java APIs for ASN.1 extension and utility APIs used to support bcpkix and bctls with the BC FIPS provider. The APIs may also be used with other providers although if being used in a FIPS context it is the responsibility of the user to ensure that any other providers used are FIPS certified and used appropriately.

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package org.bouncycastle.oer;


import java.io.ByteArrayInputStream;
import java.io.EOFException;
import java.io.FilterInputStream;
import java.io.IOException;
import java.io.InputStream;
import java.io.PrintWriter;
import java.math.BigInteger;
import java.util.Iterator;
import java.util.List;

import org.bouncycastle.asn1.ASN1Boolean;
import org.bouncycastle.asn1.ASN1Encodable;
import org.bouncycastle.asn1.ASN1EncodableVector;
import org.bouncycastle.asn1.ASN1Enumerated;
import org.bouncycastle.asn1.ASN1Integer;
import org.bouncycastle.asn1.ASN1Object;
import org.bouncycastle.asn1.DERBitString;
import org.bouncycastle.asn1.DERIA5String;
import org.bouncycastle.asn1.DERNull;
import org.bouncycastle.asn1.DEROctetString;
import org.bouncycastle.asn1.DERSequence;
import org.bouncycastle.asn1.DERTaggedObject;
import org.bouncycastle.asn1.DERUTF8String;
import org.bouncycastle.util.BigIntegers;
import org.bouncycastle.util.Strings;
import org.bouncycastle.util.encoders.Hex;
import org.bouncycastle.util.io.Streams;

public class OERInputStream
    extends FilterInputStream
{

    private static final int[] bits = new int[]{1, 2, 4, 8, 16, 32, 64, 128};
    private static final int[] bitsR = new int[]{128, 64, 32, 16, 8, 4, 2, 1};
    protected PrintWriter debugOutput = null;
    private int maxByteAllocation = 1024 * 1024;
    protected PrintWriter debugStream = null;


    /**
     * Root decoder of OER streaming data.
     * Maximum byte array allocation is 1Mb
     *
     * @param src source stream.
     */
    public OERInputStream(InputStream src)
    {
        super(src);
    }

    /**
     * Create an OER input and set the maximum byte array allocation size;
     *
     * @param src               The src.
     * @param maxByteAllocation the largest byte array that may eb allocated by this parser.
     */
    public OERInputStream(InputStream src, int maxByteAllocation)
    {
        super(src);
        this.maxByteAllocation = maxByteAllocation;
    }

    /**
     * Decode byte array.
     *
     * @param src     The src
     * @param element The definition
     * @return Asn1Encodable instance
     * @throws IOException
     */
    public static ASN1Encodable parse(byte[] src, Element element)
        throws IOException
    {
        OERInputStream in = new OERInputStream(new ByteArrayInputStream(src));
        return in.parse(element);
    }


    private int countOptionalChildTypes(Element element)
    {
        int optionalElements = 0;
        for (Iterator it = element.getChildren().iterator(); it.hasNext(); )
        {
            Element e = (Element)it.next();

            optionalElements += e.isExplicit() ? 0 : 1;
        }
        return optionalElements;
    }

    public ASN1Object parse(Element element)
        throws IOException
    {


        switch (element.getBaseType())
        {

        case OPAQUE:
            ElementSupplier es = element.resolveSupplier();
            return parse(new Element(es.build(), element));

        case Switch:
            throw new IllegalStateException("A switch element should only be found within a sequence.");

        case Supplier:
            return parse(new Element(element.getElementSupplier().build(), element));

        case SEQ_OF:
        {
            int l = readLength().intLength();

            // This l is the number of bytes that holds the actual length of the sequence of.

            byte[] lenEnc = allocateArray(l);
            if (Streams.readFully(this, lenEnc) != lenEnc.length)
            {
                throw new IOException("could not read all of count of seq-of values");
            }

            //
            // The actual number of elements encoded into this seq-of.
            //
            int j = BigIntegers.fromUnsignedByteArray(lenEnc).intValue();


            debugPrint(element + ("(len = " + j + ")"));

            ASN1EncodableVector avec = new ASN1EncodableVector();

            if (element.getChildren().get(0).getaSwitch() != null)
            {
                throw new IllegalStateException("element def for item in SEQ OF has a switch, switches only supported in sequences");
            }

            for (int n = 0; n < j; n++)
            {
                Element def = Element.expandDeferredDefinition(element.getChildren().get(0), element);
                avec.add(parse(def));
            }
            return new DERSequence(avec);
        }

        case SEQ:
        {
            Sequence sequence = new Sequence(in, element);//  sequence(countOptionalChildTypes(element), element.hasDefaultChildren(), element.isExtensionsInDefinition());
            debugPrint(element + (sequence.toString()));
            ASN1EncodableVector avec = new ASN1EncodableVector();
            List children = element.getChildren();
            int t = 0;

            //
            // Read root block of sequence.
            //
            int optionalPos = 0;
            for (t = 0; t < children.size(); t++)
            {
                Element child = children.get(t);

                if (child.getBaseType() == OERDefinition.BaseType.EXTENSION)
                {
                    // We don't encode these, they are marker when the possibility of an extension is indicated but no actual extensions
                    // are defined as yet.
                    continue;
                }

                if (child.getBlock() > 0)
                {
                    // We have exited the root block, so we need to break this loop.
                    break;
                }

                child = Element.expandDeferredDefinition(child, element);

                Element resolvedChild;
                if (child.getaSwitch() != null)
                {
                    resolvedChild = child.getaSwitch().result(new SwitchIndexer.Asn1EncodableVectorIndexer(avec));
                    if (resolvedChild.getParent() != element)
                    {
                        resolvedChild = new Element(resolvedChild, element);
                    }
                }
                else
                {
                    resolvedChild = child;
                }

                if (sequence.valuePresent == null)
                {
                    // Sequence with no optionals and no extensions defined.
                    avec.add(parse(resolvedChild));
                }
                else
                {

                    if (sequence.valuePresent[t])
                    {
                        if (resolvedChild.isExplicit())
                        {
                            avec.add(parse(resolvedChild));
                        }
                        else
                        {
                            // Optional and present
                            avec.add(OEROptional.getInstance(parse(resolvedChild)));
                        }
                    }
                    else
                    {
                        if (resolvedChild.getDefaultValue() != null)
                        {
                            avec.add(child.getDefaultValue());
                        }
                        else
                        {
                            avec.add(absent(child));
                        }
                    }
                }
            }

            //
            // We have and extension block
            //
            if (sequence.extensionFlagSet)
            {
                int l = readLength().intLength();
                byte[] rawPresenceList = allocateArray(l);
                if (Streams.readFully(in, rawPresenceList) != rawPresenceList.length)
                {
                    throw new IOException("did not fully read presence list.");
                }

                int presenceIndex = 8;
                int stop = rawPresenceList.length * 8 - rawPresenceList[0];


                for (; t < children.size() || presenceIndex < stop; t++)
                {
                    Element child = t < children.size() ? children.get(t) : null;

                    if (child == null)
                    {
                        // Extensions that we do not
                        // have a definition for need to be consumed and discarded.
                        if ((rawPresenceList[presenceIndex / 8] & bitsR[presenceIndex % 8]) != 0)
                        {
                            // skip.
                            int len = readLength().intLength();
                            while (--len >= 0)
                            {
                                in.read();
                            }


                        }
                    }
                    else
                    {
                        if (presenceIndex < stop &&
                            (rawPresenceList[presenceIndex / 8] & bitsR[presenceIndex % 8]) != 0)
                        {
                            avec.add(parseOpenType(child));
                        }
                        else
                        {
                            if (child.isExplicit())
                            {
                                throw new IOException("extension is marked as explicit but is not defined in presence list");
                            }
                            else
                            {
                                avec.add(OEROptional.ABSENT);
                            }
                        }
                    }
                    presenceIndex++;
                }
            }

            return new DERSequence(avec);
        }

        case CHOICE:
        {
            Choice choice = choice();
            debugPrint(choice.toString() + " " + choice.tag);
            if (choice.isContextSpecific())
            {
                Element choiceDef = Element.expandDeferredDefinition(element.getChildren().get(choice.getTag()), element);

                if (choiceDef.getBlock() > 0)
                {
                    debugPrint("Chosen (Ext): " + choiceDef);
                    return new DERTaggedObject(choice.tag, parseOpenType(choiceDef));
                }
                else
                {
                    debugPrint("Chosen: " + choiceDef);
                    return new DERTaggedObject(choice.tag, parse(choiceDef));
                }
            }
            else if (choice.isApplicationTagClass())
            {
                throw new IllegalStateException("Unimplemented tag type");
            }
            else if (choice.isPrivateTagClass())
            {
                throw new IllegalStateException("Unimplemented tag type");
            }
            else if (choice.isUniversalTagClass())
            {
                throw new IllegalStateException("Unimplemented tag type");
            }
            else
            {
                throw new IllegalStateException("Unimplemented tag type");
            }
        }
        case ENUM:
        {
            BigInteger bi = enumeration();
            debugPrint(element + ("ENUM(" + bi + ") = " + element.getChildren().get(bi.intValue()).getLabel()));
            return new ASN1Enumerated(bi);
        }
        case INT:
        {

            byte[] data;
            BigInteger bi;


            //
            // Special fixed width cases used for signed and unsigned 8/16/24/32/64 bit numbers.
            //
            int bytesToRead = element.intBytesForRange();
            if (bytesToRead != 0) // Fixed width
            {
                data = allocateArray(Math.abs(bytesToRead));
                Streams.readFully(this, data);

                if (bytesToRead < 0)
                {
                    bi = new BigInteger(data); // Twos compliment
                }
                else
                {
                    bi = BigIntegers.fromUnsignedByteArray(data);
                }


            }
            else if (element.isLowerRangeZero()) // INTEGER(0 ... MAX) or INTEGER (0 ... n)
            {
                LengthInfo lengthInfo = readLength();
                data = allocateArray(lengthInfo.intLength());
                Streams.readFully(this, data);
                if (data.length == 0)
                {
                    bi = BigInteger.ZERO;
                }
                else
                {
                    bi = new BigInteger(1, data);
                }
            }
            else
            {

                //
                // Classic twos compliment.
                //
                LengthInfo lengthInfo = readLength();
                data = allocateArray(lengthInfo.intLength());
                Streams.readFully(this, data);
                if (data.length == 0)
                {
                    bi = BigInteger.ZERO;
                }
                else
                {
                    bi = new BigInteger(data);
                }
            }


            if (debugOutput != null)
            {
                debugPrint(element + ("INTEGER byteLen= " + data.length + " hex= " + bi.toString(16) + ")"));
            }

            return new ASN1Integer(bi);

        }
        case OCTET_STRING:
        {
            byte[] data;

            int readSize = 0;

            if (element.getUpperBound() != null && element.getUpperBound().equals(element.getLowerBound()))
            {
                // Fixed length there is no range.
                readSize = element.getUpperBound().intValue();
            }
            else
            {
                readSize = readLength().intLength();
            }

            data = allocateArray(readSize);


            if (Streams.readFully(this, data) != readSize)
            {
                throw new IOException("did not read all of " + element.getLabel());
            }

            if (debugOutput != null)
            {
                // -DM Hex.toHexString
                int l = Math.min(data.length, 32);
                debugPrint(element + ("OCTET STRING (" + data.length + ") = " + Hex.toHexString(data, 0, l) + " " + ((data.length > 32) ? "..." : "")));
            }

            return new DEROctetString(data);
        }
        case IA5String:
        {
            byte[] data;

            if (element.isFixedLength())
            {
                data = allocateArray(element.getUpperBound().intValue());
            }
            else
            {
                // 27.3 and 27.4 a length determinant followed by a number of octets.
                data = allocateArray(readLength().intLength());
            }

            if (Streams.readFully(this, data) != data.length)
            {
                throw new IOException("could not read all of IA5 string");
            }
            String content = Strings.fromByteArray(data);
            if (debugOutput != null)
            {
                debugPrint(element.appendLabel("IA5 String (" + data.length + ") = " + content));
            }
            return new DERIA5String(content);

        }

        case UTF8_STRING:
        {
            // 27.3 and 27.4 a length determinant followed by a number of octets.
            byte[] data = allocateArray(readLength().intLength());
            if (Streams.readFully(this, data) != data.length)
            {
                throw new IOException("could not read all of utf 8 string");
            }
            String content = Strings.fromUTF8ByteArray(data);
            if (debugOutput != null)
            {
                debugPrint(element + ("UTF8 String (" + data.length + ") = " + content));
            }
            return new DERUTF8String(content);
        }
        case BIT_STRING:
        {
            byte[] data;

            if (element.isFixedLength())
            {
                data = new byte[element.getLowerBound().intValue() / 8];
            }
            else if (BigInteger.ZERO.compareTo(element.getUpperBound()) > 0)
            {
                // Fixed size.
                data = allocateArray(element.getUpperBound().intValue() / 8);
            }
            else
            {
                // Length defined.
                data = allocateArray(readLength().intLength() / 8);
            }
            Streams.readFully(this, data);
            if (debugOutput != null)
            {
                StringBuffer sb = new StringBuffer();
                sb.append("BIT STRING(" + (data.length * 8) + ") = ");
                for (int i = 0; i != data.length; i++)
                {
                    byte b = data[i];
                    for (int t = 0; t < 8; t++)
                    {
                        sb.append((b & 0x80) > 0 ? "1" : "0");
                        b <<= 1;
                    }
                }
                debugPrint(element + (sb.toString()));
            }

            return new DERBitString(data);

        }
        case NULL:
            debugPrint(element + ("NULL"));
            return DERNull.INSTANCE;

        case EXTENSION:

            LengthInfo li = readLength();
            byte[] value = new byte[li.intLength()];
            if (Streams.readFully(this, value) != li.intLength())
            {
                throw new IOException("could not read all of count of open value in choice (...) ");
            }

            // -DM Hex.toHexString
            debugPrint("ext " + li.intLength() + " " + Hex.toHexString(value));
            return new DEROctetString(value);
        case BOOLEAN:
            if (read() == 0)
            {
                return ASN1Boolean.FALSE;
            }
            return ASN1Boolean.TRUE;
        }


        throw new IllegalStateException("Unhandled type " + element.getBaseType());
    }

    private ASN1Encodable absent(Element child)
    {
        debugPrint(child + ("Absent"));
        return OEROptional.ABSENT;
    }

    private byte[] allocateArray(int requiredSize)
    {
        if (requiredSize > maxByteAllocation)
        {
            throw new IllegalArgumentException("required byte array size " + requiredSize + " was greater than " + maxByteAllocation);
        }
        return new byte[requiredSize];
    }

    public BigInteger parseInt(boolean unsigned, int size)
        throws Exception
    {
        byte[] buf = new byte[size];
        int read = Streams.readFully(this, buf);
        if (read != buf.length)
        {
            throw new IllegalStateException("integer not fully read");
        }
        return unsigned ? new BigInteger(1, buf) : new BigInteger(buf);

    }

    public BigInteger uint8()
        throws Exception
    {
        return parseInt(true, 1);
    }

    public BigInteger uint16()
        throws Exception
    {
        return parseInt(true, 2);
    }

    public BigInteger uint32()
        throws Exception
    {
        return parseInt(true, 4);
    }

    public BigInteger uint64()
        throws Exception
    {
        return parseInt(false, 8);
    }

    public BigInteger int8()
        throws Exception
    {
        return parseInt(false, 1);
    }

    public BigInteger int16()
        throws Exception
    {
        return parseInt(false, 2);
    }

    public BigInteger int32()
        throws Exception
    {
        return parseInt(false, 4);
    }

    public BigInteger int64()
        throws Exception
    {
        return parseInt(false, 8);
    }

    /**
     * Reads a length determinant deals with long ans short versions.
     *
     * @return
     * @throws Exception
     */
    public LengthInfo readLength()
        throws IOException
    {
        int accumulator = 0;
        int byteVal = read();
        if (byteVal == -1)
        {
            throw new EOFException("expecting length");
        }

        if ((byteVal & 0x80) == 0) // short form 8.6.4
        {
            debugPrint("Len (Short form): " + (byteVal & 0x7F));
            return new LengthInfo(BigInteger.valueOf(byteVal & 0x7F), true);
        }
        else
        {
            // Long form 8.6.5


            byte[] lengthInt = new byte[(byteVal & 0x7F)];
            if (Streams.readFully(this, lengthInt) != lengthInt.length)
            {
                throw new EOFException("did not read all bytes of length definition");
            }

            // -DM Hex.toHexString
            debugPrint("Len (Long Form): " + (byteVal & 0x7F) + " actual len: " + Hex.toHexString(lengthInt));

            return new LengthInfo(BigIntegers.fromUnsignedByteArray(lengthInt), false);
        }

    }


    public BigInteger enumeration()
        throws IOException
    {
        int first = read();
        if (first == -1)
        {
            throw new EOFException("expecting prefix of enumeration");
        }
        //
        // If the MSB is set then it is an extended enumeration, the trailing 7 bits are the number
        // of bytes in the encoding otherwise the value is the value of the byte.
        //
        if ((first & 0x80) == 0x80)
        {
            // Extended.
            int l = first & 0x7f;
            if (l == 0)
            {
                return BigInteger.ZERO;
            }
            byte[] buf = new byte[l];
            int i = Streams.readFully(this, buf);

            if (i != buf.length)
            {
                throw new EOFException("unable to fully read integer component of enumeration");
            }

            return new BigInteger(1, buf);
        }
        return BigInteger.valueOf(first);
    }


    protected ASN1Encodable parseOpenType(Element e)
        throws IOException
    {
        int len = readLength().intLength();
        byte[] openTypeRaw = allocateArray(len);
        if (Streams.readFully(in, openTypeRaw) != openTypeRaw.length)
        {
            throw new IOException("did not fully read open type as raw bytes");
        }
        OERInputStream oerIn = null;
        try
        {
            ByteArrayInputStream bin = new ByteArrayInputStream(openTypeRaw);
            oerIn = new OERInputStream(bin);
            return oerIn.parse(e);
        }
        finally
        {
            if (oerIn != null)
            {
                oerIn.close();
            }
        }

    }


    public Choice choice()
        throws IOException
    {
        return new Choice(this);
    }


    protected void debugPrint(String what)
    {

        if (debugOutput != null)
        {
            StackTraceElement[] callStack = Thread.currentThread().getStackTrace();
            int level = -1;
            for (int i = 0; i != callStack.length; i++)
            {
                StackTraceElement ste = callStack[i];
                if (ste.getMethodName().equals("debugPrint"))
                {
                    level = 0;
                    continue;
                }
                if (ste.getClassName().contains("OERInput"))
                {
                    level++;
                }
            }

            for (; level > 0; level--)
            {
                debugOutput.append("    ");
            }
            debugOutput.append(what).append("\n");
            debugOutput.flush();
        }
    }

    public static class Choice
        extends OERInputStream
    {

        final int preamble;
        final int tag;
        final int tagClass;

        /**
         * Root decoder of OER streaming data.
         *
         * @param src source stream.
         */
        public Choice(InputStream src)
            throws IOException
        {

            super(src);
            preamble = read();
            if (preamble < 0)
            {
                throw new EOFException("expecting preamble byte of choice");
            }

            tagClass = preamble & 0xc0;
            int tag = preamble & 0x3f;
            //
            // 8.7.2.2 and 8.7.2.3 if tag >=63 then subsequent octets contain the remaining bits
            // of the tag. If the octet has bit 7 set then there is another octet to follow.
            //
            if (tag >= 63)
            {
                tag = 0;
                int part = 0;
                do
                {
                    part = src.read();
                    if (part < 0)
                    {
                        throw new EOFException("expecting further tag bytes");
                    }
                    tag <<= 7;
                    tag |= part & 0x7f;
                }
                while ((part & 0x80) != 0);

            }

            this.tag = tag;
        }

        public String toString()
        {
            StringBuilder sb = new StringBuilder();
            sb.append("CHOICE(");
            switch (tagClass)
            {
            case 0:
                sb.append("Universal ");
                break;
            case 0x40:
                sb.append("Application ");
                break;
            case 0xc0:
                sb.append("Private ");
                break;
            case 0x80:
                sb.append("ContextSpecific ");
                break;
            }
            sb.append("Tag = " + tag);
            sb.append(")");
            return sb.toString();
        }

        public int getTagClass()
        {
            return tagClass;
        }

        public int getTag()
        {
            return tag;
        }

        public boolean isContextSpecific()
        {
            return tagClass == 0x80;
        }

        public boolean isUniversalTagClass()
        {
            return tagClass == 0;
        }

        public boolean isApplicationTagClass()
        {
            return tagClass == 0x40;
        }

        public boolean isPrivateTagClass()
        {
            return tagClass == 0xc0;
        }

    }

    /**
     * OER sequence decoder, decodes prefix and determines which optional
     * parts are available.
     */
    public static class Sequence
        extends OERInputStream
    {
        private final int preamble;
        private final boolean[] valuePresent;
        private final boolean extensionFlagSet;

        public Sequence(InputStream src, Element element)
            throws IOException
        {
            super(src);
            if (element.hasPopulatedExtension() || element.getOptionals() > 0 || element.hasDefaultChildren())
            {
                preamble = in.read();
                if (preamble < 0)
                {
                    throw new EOFException("expecting preamble byte of sequence");
                }
                // We expect extensions AND the Extension bit (7) is set.
                extensionFlagSet = element.hasPopulatedExtension() && ((preamble & 0x80) == 0x80);
            }
            else
            {
                preamble = 0;
                extensionFlagSet = false;
                valuePresent = null;
                return;
            }

            valuePresent = new boolean[element.getChildren().size()];


            int block = 0;
            int j = element.hasPopulatedExtension() ? 6 /* After extension present bit */ : 7 /* no extension bit */;
            int mask = preamble;
            int presentIndex = 0;
            for (Element child : element.getChildren())
            {
                if (child.getBaseType() == OERDefinition.BaseType.EXTENSION)
                {
                    continue;
                }

                if (child.getBlock() != block)
                {
                    // Shifted into an extension block
                    // We need to exit here because we need to read content before picking up
                    // the extension block.
                    break;
                }

                if (child.isExplicit())
                {
                    valuePresent[presentIndex++] = true;
                }
                else
                {
                    // Optional.
                    if (j < 0)
                    {
                        mask = src.read();
                        if (mask < 0)
                        {
                            throw new EOFException("expecting mask byte sequence");
                        }
                        j = 7;
                    }
                    valuePresent[presentIndex++] = (mask & bits[j]) > 0;
                    j--;
                }

            }


        }




        public boolean hasOptional(int index)
        {
            return valuePresent[index];
        }

        public boolean hasExtension()
        {
            return extensionFlagSet;
        }


        public String toString()
        {
            StringBuilder sb = new StringBuilder();
            sb.append("SEQ(");
            sb.append(hasExtension() ? "Ext " : "");

            if (valuePresent == null)
            {
                sb.append("*");
            }
            else
            {
                for (int t = 0; t < valuePresent.length; t++)
                {
                    if (valuePresent[t])
                    {
                        sb.append("1");
                    }
                    else
                    {
                        sb.append("0");
                    }
                }
            }
            sb.append(")");
            return sb.toString();
        }

    }

    private static final class LengthInfo
    {
        private final BigInteger length;
        private final boolean shortForm;

        public LengthInfo(BigInteger length, boolean shortForm)
        {
            this.length = length;
            this.shortForm = shortForm;
        }

        private int intLength()
        {
            return BigIntegers.intValueExact(length);
        }
    }


}




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