
org.bridgedb.rdf.CreateRdf Maven / Gradle / Ivy
// BridgeDb,
// An abstraction layer for identifier mapping services, both local and online.
//
// Copyright 2006-2009 BridgeDb developers
// Copyright 2012-2013 Christian Y. A. Brenninkmeijer
// Copyright 2012-2013 OpenPhacts
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
//
package org.bridgedb.rdf;
import java.io.BufferedWriter;
import java.io.File;
import java.io.IOException;
import org.apache.log4j.Logger;
import org.bridgedb.IDMapper;
import org.bridgedb.bio.DataSourceTxt;
import org.bridgedb.utils.BridgeDBException;
import org.bridgedb.utils.ConfigReader;
import org.bridgedb.utils.Reporter;
/**
*
* @author Christian
*/
public class CreateRdf {
private IDMapper mapper;
private String name;
private BufferedWriter buffer;
private String sourceUriSpace;
private String targetUriSpace;
private final String LINK_PREDICATE = "skos:relatedMatch";
static final Logger logger = Logger.getLogger(CreateRdf.class);
public static void main(String[] args) throws BridgeDBException, IOException, ClassNotFoundException{
ConfigReader.logToConsole();
//Load DataSources from BioDataSource and save that
DataSourceTxt.init();
File biofile = new File("resources/BioDataSource.ttl");
BridgeDBRdfHandler.writeRdfToFile(biofile);
BridgeDBRdfHandler.parseRdfFile(biofile);
}
}
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