Download org.broadinstitute JAR files with all dependencies

gatk-test-utils from group org.broadinstitute (version 4.6.1.0)

Development on GATK 4

Group: org.broadinstitute Artifact: gatk-test-utils
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0 downloads

Artifact gatk-test-utils
Group org.broadinstitute
Version 4.6.1.0
Last update 24. October 2024
Organization not specified
URL http://github.com/broadinstitute/gatk
License Apache 2.0
Dependencies amount 0
Dependencies No dependencies
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gatk from group org.broadinstitute (version 4.6.1.0)

Development on GATK 4

Group: org.broadinstitute Artifact: gatk
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3 downloads

Artifact gatk
Group org.broadinstitute
Version 4.6.1.0
Last update 24. October 2024
Organization not specified
URL http://github.com/broadinstitute/gatk
License BSD 3-Clause
Dependencies amount 45
Dependencies barclay, owner, picard, genomicsdb, opencsv, guava, htsjdk, google-cloud-nio-GATK4-custom-patch, gov.nist.math.jama, gcs-connector, log4j-api, log4j-core, commons-lang3, commons-math3, commons-collections4, commons-vfs2, commons-io, reflections, fastutil, JTransforms, hdf5-java-bindings, gatk-native-bindings, ojalgo, ojalgo-commons-math3, spark-mllib_2.11, bdg-formats, adam-core-spark2_2.11, jgrapht-core, testng, hadoop-minicluster, hadoop-bam, hadoop-client, jsr203hadoop, kryo-serializers, netlib-native_ref-osx-x86_64, netlib-native_ref-linux-x86_64, netlib-native_system-linux-x86_64, netlib-native_system-osx-x86_64, kryo, reflectasm, gkl, gatk-bwamem-jni, gatk-fermilite-jni, sqlite-jdbc, objenesis,
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http-nio from group org.broadinstitute (version 1.1.1)

Group: org.broadinstitute Artifact: http-nio
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Artifact http-nio
Group org.broadinstitute
Version 1.1.1

pgenjni from group org.broadinstitute (version 1.0.1)

Group: org.broadinstitute Artifact: pgenjni
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Artifact pgenjni
Group org.broadinstitute
Version 1.0.1

hdf5-java-bindings from group org.broadinstitute (version 1.2.0-hdf5_2.11.0)

HDF5 java bindings

Group: org.broadinstitute Artifact: hdf5-java-bindings
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2 downloads

Artifact hdf5-java-bindings
Group org.broadinstitute
Version 1.2.0-hdf5_2.11.0
Last update 13. June 2023
Organization not specified
URL http://github.com/broadinstitute/hdf5-java-bindings
License BSD 3-Clause
Dependencies amount 5
Dependencies gatk-native-bindings, commons-io, slf4j-log4j12, commons-lang3, commons-math3,
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barclay from group org.broadinstitute (version 5.0.0)

Development on Barclay command line parsing and documentation utilities

Group: org.broadinstitute Artifact: barclay
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3 downloads

Artifact barclay
Group org.broadinstitute
Version 5.0.0
Last update 06. February 2023
Organization not specified
URL http://github.com/broadinstitute/barclay
License BSD 3-Clause
Dependencies amount 6
Dependencies jopt-simple, commons-lang3, log4j-api, log4j-core, freemarker, gson,
There are maybe transitive dependencies!

gatk-minimap2-jni from group org.broadinstitute (version 1.0.2)

java bindings for the minimap2 aligner

Group: org.broadinstitute Artifact: gatk-minimap2-jni
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0 downloads

Artifact gatk-minimap2-jni
Group org.broadinstitute
Version 1.0.2
Last update 13. March 2020
Organization not specified
URL http://github.com/broadinstitute/gatk-minimap2-jni
License BSD 3-Clause
Dependencies amount 0
Dependencies No dependencies
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google-cloud-nio-GATK4-custom-patch from group org.broadinstitute (version 0.20.5-alpha-GCS-RETRY-FIX)

FileSystemProvider for Java NIO to access Google Cloud Storage transparently.

Group: org.broadinstitute Artifact: google-cloud-nio-GATK4-custom-patch
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2 downloads

Artifact google-cloud-nio-GATK4-custom-patch
Group org.broadinstitute
Version 0.20.5-alpha-GCS-RETRY-FIX
Last update 10. August 2018
Organization Google
URL https://github.com/GoogleCloudPlatform/google-cloud-java/tree/master/google-cloud-contrib/google-cloud-nio
License Google Cloud Software License
Dependencies amount 4
Dependencies google-cloud-storage, guava, jsr305, javax.inject,
There are maybe transitive dependencies!

gatk-bwamem-jni from group org.broadinstitute (version 1.0.5)

java bindings for the bwa-mem assembler

Group: org.broadinstitute Artifact: gatk-bwamem-jni
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0 downloads

Artifact gatk-bwamem-jni
Group org.broadinstitute
Version 1.0.5
Last update 03. May 2018
Organization not specified
URL http://github.com/broadinstitute/gatk-bwamem-jni
License BSD 3-Clause
Dependencies amount 0
Dependencies No dependencies
There are maybe transitive dependencies!

gatk-fermilite-jni from group org.broadinstitute (version 1.2.1)

java Bindings for the fermi-lite assembler

Group: org.broadinstitute Artifact: gatk-fermilite-jni
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0 downloads

Artifact gatk-fermilite-jni
Group org.broadinstitute
Version 1.2.1
Last update 18. April 2018
Organization not specified
URL http://github.com/broadinstitute/gatk-fermlite-jni
License BSD 3-Clause
Dependencies amount 0
Dependencies No dependencies
There are maybe transitive dependencies!

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