
org.deeplearning4j.ui.api.ApiResource Maven / Gradle / Ivy
/*
*
* * Copyright 2015 Skymind,Inc.
* *
* * Licensed under the Apache License, Version 2.0 (the "License");
* * you may not use this file except in compliance with the License.
* * You may obtain a copy of the License at
* *
* * http://www.apache.org/licenses/LICENSE-2.0
* *
* * Unless required by applicable law or agreed to in writing, software
* * distributed under the License is distributed on an "AS IS" BASIS,
* * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* * See the License for the specific language governing permissions and
* * limitations under the License.
*
*/
package org.deeplearning4j.ui.api;
import com.fasterxml.jackson.jaxrs.json.JacksonJsonProvider;
import org.apache.commons.io.FileUtils;
import org.apache.commons.math3.stat.descriptive.rank.Percentile;
import org.deeplearning4j.ui.providers.ObjectMapperProvider;
import org.deeplearning4j.ui.storage.SessionStorage;
import org.deeplearning4j.ui.storage.def.ObjectType;
import org.deeplearning4j.ui.uploads.FileResource;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import javax.ws.rs.*;
import javax.ws.rs.client.Client;
import javax.ws.rs.client.ClientBuilder;
import javax.ws.rs.core.MediaType;
import javax.ws.rs.core.Response;
import java.io.File;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
/**
* This class handles T-SNE coords upload (in tsv format), and provides output to the browser via JSON
*
* @author Adam Gibson
*/
@Path("/api")
@Produces(MediaType.APPLICATION_JSON)
public class ApiResource extends FileResource {
// TODO: this list should be replaced with HistoryStorage
private static final Logger logger = LoggerFactory.getLogger(FileResource.class);
private List coords;
private Client client = ClientBuilder.newClient().register(JacksonJsonProvider.class).register(new ObjectMapperProvider());
private volatile SessionStorage storage = SessionStorage.getInstance();
/**
* The file path for uploads
*
* @param filePath the file path for uploads
*/
public ApiResource(String filePath) {
super(filePath);
}
/**
* The file path for uploads
*
*/
public ApiResource() {
this(".");
}
@POST
@Path("/update")
@Produces(MediaType.APPLICATION_JSON)
public Response update() throws IOException {
//String content = client.target(resource.getUrl()).request(MediaType.TEXT_PLAIN_TYPE).get(String.class);
//List testLines = IOUtils.readLines(new ByteArrayInputStream(content.getBytes()));
//HistoryStorage.getInstance().put("TSNE", Pair.makePair(1, 0), testLines);
List testLines = (List) storage.getObject("UploadedFile", ObjectType.TSNE);
return Response.ok(testLines).build();
}
@GET
@Path("/coords")
public Response coords(@QueryParam("filter") boolean filterExtrems, @QueryParam("sid") String sessionId) {
/*
TODO: here we should have ad-hoc for HistoryStorage.
For T-SNE we'll probably have no real history though, so it's going to be plain common storage for both internally originated
2D coordinates, and data uploaded by user
*/
/*
// actually we don't need that exception here, just show notification on page
if(coords.isEmpty())
throw new IllegalStateException("Unable to get coordinates; empty list");
*/
List something = (List) storage.getObject(sessionId, ObjectType.TSNE);
if (1>0 && something != null) {
List filtered = new ArrayList<>();
Percentile percentile = new Percentile();
double[] axisX = new double[something.size()];
double[] axisY = new double[something.size()];
int cnt = 0;
for (String line: something) {
try {
String split[] = line.split(",");
// scan along X dimension
axisX[cnt] = Double.valueOf(split[0]);
// scan along Y dimension
axisY[cnt] = Double.valueOf(split[1]);
} catch (Exception e) {
; //
}
cnt++;
}
double x85 = percentile.evaluate(axisX, 95);
double y85 = percentile.evaluate(axisY, 95);
double x15 = percentile.evaluate(axisX, 5);
double y15 = percentile.evaluate(axisY, 5);
/*
logger.info("X 85: " + x85);
logger.info("Y 85: " + y85);
logger.info("X 15: " + x15);
logger.info("Y 15: " + y15);
*/
// filter out everything that doesn't fits into original 85 quantile
for (String line: something) {
try {
String split[] = line.split(",");
// scan along X dimension
double x = Double.valueOf(split[0]);
// scan along Y dimension
double y = Double.valueOf(split[1]);
if (x >= x15 && x <= x85 ) {
if (y >= y15 && y <= y85) {
filtered.add(line);
}
}
} catch (Exception e) {
; //
}
}
return Response.ok(filtered).build();
} else return Response.ok(something).build();
}
public void setPath(String path) throws IOException {
coords = FileUtils.readLines(new File(path));
}
@POST
@Path("coords")
@Consumes(MediaType.APPLICATION_JSON)
public Response postCoordinates(List list, @QueryParam("sid") String sessionId) {
storage.putObject(sessionId, ObjectType.TSNE, list);
return Response.ok().build();
}
@Override
public void handleUpload(File path) {
/*
TODO: this code should put new coords into HistoryStorage
*/
//logger.info("Calling handleUpload");
List testLines = null;
try {
testLines = FileUtils.readLines(path);
storage.putObject("UploadedFile", ObjectType.TSNE, testLines);
} catch (IOException e) {
e.printStackTrace();
}
}
}
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