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org.dkpro.tc.ml.Experiment_ImplBase Maven / Gradle / Ivy
/*******************************************************************************
* Copyright 2015
* Ubiquitous Knowledge Processing (UKP) Lab
* Technische Universität Darmstadt
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
******************************************************************************/
package org.dkpro.tc.ml;
import java.util.ArrayList;
import java.util.List;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.uima.analysis_engine.AnalysisEngineDescription;
import org.apache.uima.fit.component.NoOpAnnotator;
import org.apache.uima.fit.factory.AnalysisEngineFactory;
import org.apache.uima.resource.ResourceInitializationException;
import org.dkpro.lab.engine.TaskContext;
import org.dkpro.lab.reporting.Report;
import org.dkpro.lab.task.impl.DefaultBatchTask;
import org.dkpro.tc.core.ml.TCMachineLearningAdapter;
/**
* Base class for TC experiment setups
*
*/
public abstract class Experiment_ImplBase
extends DefaultBatchTask
{
protected String experimentName;
private AnalysisEngineDescription preprocessing; // private as this might be overridden by a
// batch task to allow preprocessing as
// discriminator
protected List operativeViews;
protected List> innerReports;
protected TCMachineLearningAdapter mlAdapter;
protected boolean dropInvalidCases;
Log log = LogFactory.getLog(Experiment_ImplBase.class);
@Override
public void initialize(TaskContext aContext)
{
super.initialize(aContext);
try {
if (getPreprocessing() == null) {
log.warn("Preprocessing engine has not been set, will use ["
+ NoOpAnnotator.class.getSimpleName() + "] as default");
preprocessing = AnalysisEngineFactory.createEngineDescription(NoOpAnnotator.class);
}
}
catch (ResourceInitializationException e) {
throw new RuntimeException(e);
}
init();
}
protected abstract void init()
throws IllegalStateException;
public void setExperimentName(String experimentName)
{
boolean invalidCharsFound = experimentNameContainsInvalidCharacters(experimentName);
if (invalidCharsFound) {
throw new IllegalArgumentException("Your experiment name [" + experimentName
+ "] contains illegal characters. Permitted are [a-zA-Z0-9-_]");
}
this.experimentName = experimentName;
}
private boolean experimentNameContainsInvalidCharacters(String experimentName)
{
String result = experimentName.replaceAll("[a-zA-Z0-9-_]+", "");
if (result.isEmpty()) {
return false;
}
return true;
}
public void setMachineLearningAdapter(Class extends TCMachineLearningAdapter> mlAdapter)
throws IllegalArgumentException
{
try {
this.mlAdapter = mlAdapter.newInstance();
}
catch (InstantiationException e) {
throw new IllegalArgumentException(e);
}
catch (IllegalAccessException e) {
throw new IllegalArgumentException(e);
}
}
public void setPreprocessing(AnalysisEngineDescription preprocessing)
{
this.preprocessing = preprocessing;
}
public AnalysisEngineDescription getPreprocessing()
{
return preprocessing;
}
public void setOperativeViews(List operativeViews)
{
this.operativeViews = operativeViews;
}
/**
* Adds a report for the inner test task
*
* @param innerReport
* classification report or regression report
*/
public void addInnerReport(Class extends Report> innerReport)
{
if (innerReports == null) {
innerReports = new ArrayList>();
}
innerReports.add(innerReport);
}
public void setDropInvalidCases(boolean dropInvalidCases)
{
this.dropInvalidCases = dropInvalidCases;
}
}
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