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A fast and easy to use dense and sparse matrix linear algebra library written in Java.
/*
* Copyright (c) 2009-2018, Peter Abeles. All Rights Reserved.
*
* This file is part of Efficient Java Matrix Library (EJML).
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.ejml.data;
import org.ejml.UtilEjml;
import org.ejml.ops.MatrixIO;
import java.io.ByteArrayOutputStream;
import java.io.PrintStream;
import java.util.Arrays;
/**
*
* DMatrixRMaj is a row matrix with real elements that are 64-bit floats. A matrix
* is the fundamental data structure in linear algebra. Unlike a sparse matrix, there is no
* compression in a row matrix and every element is stored in memory. This allows for fast
* reads and writes to the matrix.
*
*
*
* The matrix is stored internally in a row-major 1D array format:
*
* data[ y*numCols + x ] = data[y][x]
*
* For example:
* data =
*
*
* a[0] a[1] a[2] a[3]
* a[4] a[5] a[6] a[7]
* a[8] a[9] a[10] a[11]
* a[12] a[13] a[14] a[15]
*
* @author Peter Abeles
*/
public class DMatrixRMaj extends DMatrix1Row {
/**
*
* Creates a new matrix which has the same value as the matrix encoded in the
* provided array. The input matrix's format can either be row-major or
* column-major.
*
*
*
* Note that 'data' is a variable argument type, so either 1D arrays or a set of numbers can be
* passed in:
* DenseMatrix a = new DenseMatrix(2,2,true,new double[]{1,2,3,4});
* DenseMatrix b = new DenseMatrix(2,2,true,1,2,3,4);
*
* Both are equivalent.
*
*
* @param numRows The number of rows.
* @param numCols The number of columns.
* @param rowMajor If the array is encoded in a row-major or a column-major format.
* @param data The formatted 1D array. Not modified.
*/
public DMatrixRMaj(int numRows, int numCols, boolean rowMajor, double... data) {
final int length = numRows * numCols;
this.data = new double[ length ];
this.numRows = numRows;
this.numCols = numCols;
set(numRows,numCols, rowMajor, data);
}
/**
*
* Creates a matrix with the values and shape defined by the 2D array 'data'.
* It is assumed that 'data' has a row-major formatting:
*
* data[ row ][ column ]
*
* @param data 2D array representation of the matrix. Not modified.
*/
public DMatrixRMaj(double data[][] ) {
this.numRows = data.length;
this.numCols = data[0].length;
this.data = new double[ numRows*numCols ];
int pos = 0;
for( int i = 0; i < numRows; i++ ) {
double []row = data[i];
if( row.length != numCols ) {
throw new IllegalArgumentException("All rows must have the same length");
}
System.arraycopy(row,0,this.data,pos,numCols);
pos += numCols;
}
}
/**
* Creates a new Matrix with the specified shape whose elements initially
* have the value of zero.
*
* @param numRows The number of rows in the matrix.
* @param numCols The number of columns in the matrix.
*/
public DMatrixRMaj(int numRows , int numCols ) {
data = new double[ numRows * numCols ];
this.numRows = numRows;
this.numCols = numCols;
}
/**
* Creates a new matrix which is equivalent to the provided matrix. Note that
* the length of the data will be determined by the shape of the matrix.
*
* @param orig The matrix which is to be copied. This is not modified or saved.
*/
public DMatrixRMaj(DMatrixRMaj orig ) {
this(orig.numRows,orig.numCols);
System.arraycopy(orig.data, 0, this.data, 0, orig.getNumElements());
}
/**
* This declares an array that can store a matrix up to the specified length. This is use full
* when a matrix's size will be growing and it is desirable to avoid reallocating memory.
*
* @param length The size of the matrice's data array.
*/
public DMatrixRMaj(int length ) {
data = new double[ length ];
}
/**
* Default constructor in which nothing is configured. THIS IS ONLY PUBLICLY ACCESSIBLE SO THAT THIS
* CLASS CAN BE A JAVA BEAN. DON'T USE IT UNLESS YOU REALLY KNOW WHAT YOU'RE DOING!
*/
public DMatrixRMaj(){}
/**
* Creates a new DMatrixRMaj which contains the same information as the provided Matrix64F.
*
* @param mat Matrix whose values will be copied. Not modified.
*/
public DMatrixRMaj(DMatrix mat) {
this(mat.getNumRows(),mat.getNumCols());
for( int i = 0; i < numRows; i++ ) {
for( int j = 0; j < numCols; j++ ) {
set(i,j, mat.get(i,j));
}
}
}
/**
* Creates a new DMatrixRMaj around the provided data. The data must encode
* a row-major matrix. Any modification to the returned matrix will modify the
* provided data.
*
* @param numRows Number of rows in the matrix.
* @param numCols Number of columns in the matrix.
* @param data Data that is being wrapped. Referenced Saved.
* @return A matrix which references the provided data internally.
*/
public static DMatrixRMaj wrap(int numRows , int numCols , double []data ) {
DMatrixRMaj s = new DMatrixRMaj();
s.data = data;
s.numRows = numRows;
s.numCols = numCols;
return s;
}
@Override
public void reshape(int numRows, int numCols, boolean saveValues) {
if( data.length < numRows * numCols ) {
double []d = new double[ numRows*numCols ];
if( saveValues ) {
System.arraycopy(data,0,d,0,getNumElements());
}
this.data = d;
}
this.numRows = numRows;
this.numCols = numCols;
}
/**
*
* Assigns the element in the Matrix to the specified value. Performs a bounds check to make sure
* the requested element is part of the matrix.
*
* aij = value
*
*
* @param row The row of the element.
* @param col The column of the element.
* @param value The element's new value.
*/
@Override
public void set( int row , int col , double value ) {
if( col < 0 || col >= numCols || row < 0 || row >= numRows ) {
throw new IllegalArgumentException("Specified element is out of bounds: ("+row+" , "+col+")");
}
data[ row * numCols + col ] = value;
}
@Override
public void unsafe_set( int row , int col , double value ) {
data[ row * numCols + col ] = value;
}
/**
*
* Adds 'value' to the specified element in the matrix.
*
* aij = aij + value
*
*
* @param row The row of the element.
* @param col The column of the element.
* @param value The value that is added to the element
*/
// todo move to commonops
public void add( int row , int col , double value ) {
if( col < 0 || col >= numCols || row < 0 || row >= numRows ) {
throw new IllegalArgumentException("Specified element is out of bounds");
}
data[ row * numCols + col ] += value;
}
/**
* Returns the value of the specified matrix element. Performs a bounds check to make sure
* the requested element is part of the matrix.
*
* @param row The row of the element.
* @param col The column of the element.
* @return The value of the element.
*/
@Override
public double get( int row , int col ) {
if( col < 0 || col >= numCols || row < 0 || row >= numRows ) {
throw new IllegalArgumentException("Specified element is out of bounds: "+row+" "+col);
}
return data[ row * numCols + col ];
}
@Override
public double unsafe_get( int row , int col ) {
return data[ row * numCols + col ];
}
@Override
public int getIndex( int row , int col ) {
return row * numCols + col;
}
/**
* Determines if the specified element is inside the bounds of the Matrix.
*
* @param row The element's row.
* @param col The element's column.
* @return True if it is inside the matrices bound, false otherwise.
*/
public boolean isInBounds( int row , int col ) {
return( col >= 0 && col < numCols && row >= 0 && row < numRows );
}
/**
* Returns the number of elements in this matrix, which is equal to
* the number of rows times the number of columns.
*
* @return The number of elements in the matrix.
*/
@Override
public int getNumElements() {
return numRows*numCols;
}
/**
* Sets this matrix equal to the matrix encoded in the array.
*
* @param numRows The number of rows.
* @param numCols The number of columns.
* @param rowMajor If the array is encoded in a row-major or a column-major format.
* @param data The formatted 1D array. Not modified.
*/
public void set(int numRows, int numCols, boolean rowMajor, double ...data)
{
reshape(numRows,numCols);
int length = numRows*numCols;
if( length > this.data.length )
throw new IllegalArgumentException("The length of this matrix's data array is too small.");
if( rowMajor ) {
System.arraycopy(data,0,this.data,0,length);
} else {
int index = 0;
for( int i = 0; i < numRows; i++ ) {
for( int j = 0; j < numCols; j++ ) {
this.data[index++] = data[j*numRows+i];
}
}
}
}
/**
* Sets all elements equal to zero.
*/
public void zero() {
Arrays.fill(data, 0, getNumElements(), 0.0);
}
/**
* Creates and returns a matrix which is idential to this one.
*
* @return A new identical matrix.
*/
@SuppressWarnings({"unchecked"})
public DMatrixRMaj copy() {
return new DMatrixRMaj(this);
}
@Override
public void set(Matrix original) {
DMatrix m = (DMatrix)original;
reshape(original.getNumRows(),original.getNumCols());
if( original instanceof DMatrixRMaj) {
// do a faster copy if its of type DMatrixRMaj
System.arraycopy(((DMatrixRMaj)m).data,0,data,0,numRows*numCols);
} else {
int index = 0;
for (int i = 0; i < numRows; i++) {
for (int j = 0; j < numCols; j++) {
data[index++] = m.get(i, j);
}
}
}
}
/**
* Prints the value of this matrix to the screen. For more options see
* {@link UtilEjml}
*
*/
@Override
public void print() {
MatrixIO.print(System.out,this);
}
public void printJava( String format ) {
MatrixIO.printJava(System.out,this,format);
}
/**
*
* Prints the value of this matrix to the screen using the same format as {@link java.io.PrintStream#printf}.
*
*
* @param format The format which each element is printed uses.
*/
public void print( String format ) {
MatrixIO.print(System.out,this,format);
}
/**
*
* Converts the array into a string format for display purposes.
* The conversion is done using {@link MatrixIO#print(java.io.PrintStream, DMatrix)}.
*
*
* @return String representation of the matrix.
*/
@Override
public String toString() {
ByteArrayOutputStream stream = new ByteArrayOutputStream();
MatrixIO.print(new PrintStream(stream),this);
return stream.toString();
}
@Override
public T createLike() {
return (T)new DMatrixRMaj(numRows,numCols);
}
@Override
public MatrixType getType() {
return MatrixType.DDRM;
}
}