org.elasticsearch.hadoop.serialization.ScrollReader Maven / Gradle / Ivy
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* Licensed to Elasticsearch under one or more contributor
* license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright
* ownership. Elasticsearch licenses this file to you under
* the Apache License, Version 2.0 (the "License"); you may
* not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
*/
package org.elasticsearch.hadoop.serialization;
import java.io.IOException;
import java.io.InputStream;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.elasticsearch.hadoop.EsHadoopIllegalArgumentException;
import org.elasticsearch.hadoop.cfg.Settings;
import org.elasticsearch.hadoop.rest.EsHadoopParsingException;
import org.elasticsearch.hadoop.serialization.Parser.NumberType;
import org.elasticsearch.hadoop.serialization.Parser.Token;
import org.elasticsearch.hadoop.serialization.builder.ValueParsingCallback;
import org.elasticsearch.hadoop.serialization.builder.ValueReader;
import org.elasticsearch.hadoop.serialization.dto.mapping.Field;
import org.elasticsearch.hadoop.serialization.dto.mapping.MappingUtils;
import org.elasticsearch.hadoop.serialization.field.FieldFilter;
import org.elasticsearch.hadoop.serialization.field.FieldFilter.NumberedInclude;
import org.elasticsearch.hadoop.serialization.json.JacksonJsonParser;
import org.elasticsearch.hadoop.util.Assert;
import org.elasticsearch.hadoop.util.BytesArray;
import org.elasticsearch.hadoop.util.FastByteArrayInputStream;
import org.elasticsearch.hadoop.util.IOUtils;
import org.elasticsearch.hadoop.util.StringUtils;
/**
* Class handling the conversion of data from ES to target objects. It performs tree navigation tied to a potential ES mapping (if available).
* Expected to read a _search response.
*/
public class ScrollReader {
private static class JsonFragment {
static final JsonFragment EMPTY = new JsonFragment(-1, -1) {
@Override
public String toString() {
return "Empty";
}
};
final int charStart, charStop;
JsonFragment(int charStart, int charStop) {
this.charStart = charStart;
this.charStop = charStop;
}
boolean isValid() {
return charStart >= 0 && charStop >= 0;
}
@Override
public String toString() {
return "[" + charStart + "," + charStop + "]";
}
}
// a collection of Json Fragments
private static class JsonResult {
private JsonFragment doc = JsonFragment.EMPTY;
// typically only 2 fragments are needed = metadata prefix +
private final List fragments = new ArrayList(2);
void addMetadata(JsonFragment fragment) {
if (fragment != null && fragment.isValid()) {
this.fragments.add(fragment);
}
}
void addDoc(JsonFragment fragment) {
if (fragment != null && fragment.isValid()) {
this.doc = fragment;
}
}
boolean hasDoc() {
return doc.isValid();
}
int[] asCharPos() {
int positions = fragments.size() << 1;
if (doc.isValid()) {
positions += 2;
}
int[] pos = new int[positions];
int index = 0;
if (doc.isValid()) {
pos[index++] = doc.charStart;
pos[index++] = doc.charStop;
}
for (JsonFragment fragment : fragments) {
pos[index++] = fragment.charStart;
pos[index++] = fragment.charStop;
}
return pos;
}
@Override
public String toString() {
return "doc=" + doc + "metadata=" + fragments;
}
}
public static class Scroll {
static final Scroll EMPTY = new Scroll("", -1l, Collections. emptyList());
private final String scrollId;
private final long total;
private final List hits;
private Scroll(String scrollId, long total, List hits) {
this.scrollId = scrollId;
this.hits = hits;
this.total = total;
}
public String getScrollId() {
return scrollId;
}
public long getTotalHits() {
return total;
}
public List getHits() {
return hits;
}
}
public static class ScrollReaderConfig {
public ValueReader reader;
public boolean readMetadata;
public String metadataName;
public boolean returnRawJson;
public boolean ignoreUnmappedFields;
public List includeFields;
public List excludeFields;
public Field rootField;
public ScrollReaderConfig(ValueReader reader, Field rootField, boolean readMetadata, String metadataName,
boolean returnRawJson, boolean ignoreUnmappedFields, List includeFields,
List excludeFields) {
super();
this.reader = reader;
this.readMetadata = readMetadata;
this.metadataName = metadataName;
this.returnRawJson = returnRawJson;
this.ignoreUnmappedFields = ignoreUnmappedFields;
this.includeFields = includeFields;
this.excludeFields = excludeFields;
this.rootField = rootField;
}
public ScrollReaderConfig(ValueReader reader, Field rootField, boolean readMetadata, String metadataName, boolean returnRawJson, boolean ignoreUnmappedFields) {
this(reader, rootField, readMetadata, metadataName, returnRawJson, ignoreUnmappedFields, Collections. emptyList(), Collections. emptyList());
}
public ScrollReaderConfig(ValueReader reader) {
this(reader, null, false, "_metadata", false, false, Collections. emptyList(), Collections. emptyList());
}
public ScrollReaderConfig(ValueReader reader, Field field, Settings cfg) {
this(reader, field, cfg.getReadMetadata(), cfg.getReadMetadataField(),
cfg.getOutputAsJson(), cfg.getReadMappingMissingFieldsIgnore(),
StringUtils.tokenize(cfg.getReadFieldInclude()), StringUtils.tokenize(cfg.getReadFieldExclude()));
}
}
private static final Log log = LogFactory.getLog(ScrollReader.class);
private Parser parser;
private final ValueReader reader;
private final ValueParsingCallback parsingCallback;
private final Map esMapping;
private final boolean trace = log.isTraceEnabled();
private final boolean readMetadata;
private final String metadataField;
private final boolean returnRawJson;
private final boolean ignoreUnmappedFields;
private boolean insideGeo = false;
private final List includeFields;
private final List excludeFields;
private static final String[] SCROLL_ID = new String[] { "_scroll_id" };
private static final String[] HITS = new String[] { "hits" };
private static final String ID_FIELD = "_id";
private static final String[] ID = new String[] { ID_FIELD };
private static final String[] FIELDS = new String[] { "fields" };
private static final String[] SOURCE = new String[] { "_source" };
private static final String[] TOTAL = new String[] { "hits", "total" };
public ScrollReader(ScrollReaderConfig scrollConfig) {
this.reader = scrollConfig.reader;
this.parsingCallback = (reader instanceof ValueParsingCallback ? (ValueParsingCallback) reader : null);
this.readMetadata = scrollConfig.readMetadata;
this.metadataField = scrollConfig.metadataName;
this.returnRawJson = scrollConfig.returnRawJson;
this.ignoreUnmappedFields = scrollConfig.ignoreUnmappedFields;
this.includeFields = FieldFilter.toNumberedFilter(scrollConfig.includeFields);
this.excludeFields = scrollConfig.excludeFields;
Field mapping = scrollConfig.rootField;
// optimize filtering
if (ignoreUnmappedFields) {
mapping = MappingUtils.filter(mapping, scrollConfig.includeFields, scrollConfig.excludeFields);
}
this.esMapping = Field.toLookupMap(mapping);
}
public Scroll read(InputStream content) throws IOException {
Assert.notNull(content);
BytesArray copy = null;
if (log.isTraceEnabled() || returnRawJson) {
//copy content
copy = IOUtils.asBytes(content);
content = new FastByteArrayInputStream(copy);
log.trace("About to parse scroll content " + copy);
}
this.parser = new JacksonJsonParser(content);
try {
return read(copy);
} finally {
parser.close();
}
}
private Scroll read(BytesArray input) {
// get scroll_id
Token token = ParsingUtils.seek(parser, SCROLL_ID);
Assert.isTrue(token == Token.VALUE_STRING, "invalid response");
String scrollId = parser.text();
long totalHits = hitsTotal();
// check hits/total
if (totalHits == 0) {
return Scroll.EMPTY;
}
// move to hits/hits
token = ParsingUtils.seek(parser, HITS);
// move through the list and for each hit, extract the _id and _source
Assert.isTrue(token == Token.START_ARRAY, "invalid response");
List results = new ArrayList();
for (token = parser.nextToken(); token != Token.END_ARRAY; token = parser.nextToken()) {
results.add(readHit());
}
// convert the char positions into actual content
if (returnRawJson) {
// get all the longs
int[] pos = new int[results.size() * 6];
int offset = 0;
List fragmentsPos = new ArrayList(results.size());
for (Object[] result : results) {
int[] asCharPos = ((JsonResult) result[1]).asCharPos();
// remember the positions to easily replace the fragment later on
fragmentsPos.add(asCharPos);
// copy them into the lookup array
System.arraycopy(asCharPos, 0, pos, offset, asCharPos.length);
offset += asCharPos.length;
}
// convert them into byte positions
//int[] bytesPosition = BytesUtils.charToBytePosition(input, pos);
int[] bytesPosition = pos;
int bytesPositionIndex = 0;
BytesArray doc = new BytesArray(128);
// replace the fragments with the actual json
// trimming is currently disabled since it appears mainly within fields and not outside of it
// in other words in needs to be treated when the fragments are constructed
for (int fragmentIndex = 0; fragmentIndex < fragmentsPos.size(); fragmentIndex++ ) {
Object[] result = results.get(fragmentIndex);
JsonResult jsonPointers = (JsonResult) result[1];
// current fragment of doc + metadata (prefix + suffix)
// used to iterate through the byte array pointers
int[] fragmentPos = fragmentsPos.get(fragmentIndex);
int currentFragmentIndex = 0;
int rangeStart, rangeStop;
doc.add('{');
// first add the doc
if (jsonPointers.hasDoc()) {
rangeStart = bytesPosition[bytesPositionIndex];
rangeStop = bytesPosition[bytesPositionIndex + 1];
if (rangeStop - rangeStart < 0) {
throw new IllegalArgumentException(String.format("Invalid position given=%s %s",rangeStart, rangeStop));
}
// trim
//rangeStart = BytesUtils.trimLeft(input.bytes(), rangeStart, rangeStop);
//rangeStop = BytesUtils.trimRight(input.bytes(), rangeStart, rangeStop);
doc.add(input.bytes(), rangeStart, rangeStop - rangeStart);
// consumed doc pointers
currentFragmentIndex += 2;
bytesPositionIndex += 2;
}
// followed by the metadata under designed field
if (readMetadata) {
if (jsonPointers.hasDoc()) {
doc.add(',');
}
doc.add('"');
doc.add(StringUtils.jsonEncoding(metadataField));
doc.add('"');
doc.add(':');
doc.add('{');
// consume metadata
for (; currentFragmentIndex < fragmentPos.length; currentFragmentIndex += 2) {
rangeStart = bytesPosition[bytesPositionIndex];
rangeStop = bytesPosition[bytesPositionIndex + 1];
// trim
//rangeStart = BytesUtils.trimLeft(input.bytes(), rangeStart, rangeStop);
//rangeStop = BytesUtils.trimRight(input.bytes(), rangeStart, rangeStop);
if (rangeStop - rangeStart < 0) {
throw new IllegalArgumentException(String.format("Invalid position given=%s %s",rangeStart, rangeStop));
}
doc.add(input.bytes(), rangeStart, rangeStop - rangeStart);
bytesPositionIndex += 2;
}
doc.add('}');
}
doc.add('}');
// replace JsonResult with assembled document
result[1] = reader.wrapString(doc.toString());
doc.reset();
}
}
return new Scroll(scrollId, totalHits, results);
}
private Object[] readHit() {
Token t = parser.currentToken();
Assert.isTrue(t == Token.START_OBJECT, "expected object, found " + t);
return (returnRawJson ? readHitAsJson() : readHitAsMap());
}
private Object[] readHitAsMap() {
Object[] result = new Object[2];
Object metadata = null;
Object id = null;
Token t = parser.currentToken();
if (parsingCallback != null) {
parsingCallback.beginDoc();
}
// read everything until SOURCE or FIELDS is encountered
if (readMetadata) {
if (parsingCallback != null) {
parsingCallback.beginLeadMetadata();
}
metadata = reader.createMap();
result[1] = metadata;
String absoluteName;
// move parser
t = parser.nextToken();
while ((t = parser.currentToken()) != null) {
String name = parser.currentName();
absoluteName = StringUtils.stripFieldNameSourcePrefix(parser.absoluteName());
Object value = null;
if (t == Token.FIELD_NAME) {
if (!("fields".equals(name) || "_source".equals(name))) {
reader.beginField(absoluteName);
value = read(absoluteName, parser.nextToken(), null);
if (ID_FIELD.equals(name)) {
id = value;
}
reader.addToMap(metadata, reader.wrapString(name), value);
reader.endField(absoluteName);
}
else {
t = parser.nextToken();
break;
}
}
else {
// if = no _source or field found, else select START_OBJECT
t = null;
break;
}
}
if (parsingCallback != null) {
parsingCallback.endLeadMetadata();
}
Assert.notNull(id, "no id found");
result[0] = id;
}
// no metadata is needed, fast fwd
else {
Assert.notNull(ParsingUtils.seek(parser, ID), "no id found");
result[0] = reader.wrapString(parser.text());
t = ParsingUtils.seek(parser, SOURCE, FIELDS);
}
// no fields found
Object data = Collections.emptyMap();
if (t != null) {
if (parsingCallback != null) {
parsingCallback.beginSource();
}
data = read(StringUtils.EMPTY, t, null);
if (parsingCallback != null) {
parsingCallback.endSource();
}
if (readMetadata) {
reader.addToMap(data, reader.wrapString(metadataField), metadata);
}
}
else {
if (readMetadata) {
data = reader.createMap();
reader.addToMap(data, reader.wrapString(metadataField), metadata);
}
}
result[1] = data;
if (readMetadata) {
if (parsingCallback != null) {
parsingCallback.beginTrailMetadata();
}
}
// in case of additional fields (matched_query), add them to the metadata
while (parser.currentToken() == Token.FIELD_NAME) {
String name = parser.currentName();
String absoluteName = StringUtils.stripFieldNameSourcePrefix(parser.absoluteName());
if (readMetadata) {
// skip sort (useless and is an array which triggers the row mapping which does not apply)
if (!"sort".equals(name)) {
reader.addToMap(data, reader.wrapString(name), read(absoluteName, parser.nextToken(), null));
}
else {
parser.nextToken();
parser.skipChildren();
parser.nextToken();
}
}
else {
parser.nextToken();
parser.skipChildren();
parser.nextToken();
}
}
if (readMetadata) {
if (parsingCallback != null) {
parsingCallback.endTrailMetadata();
}
}
if (parsingCallback != null) {
parsingCallback.endDoc();
}
if (trace) {
log.trace(String.format("Read hit result [%s]", result));
}
return result;
}
private boolean shouldSkip(String absoluteName) {
// when parsing geo structures, ignore filtering as depending on the
// type, JSON can have an object structure
// especially for geo shapes
if (insideGeo) {
return false;
}
// if ignoring unmapped fields, the filters are already applied
if (ignoreUnmappedFields) {
return !esMapping.containsKey(absoluteName);
}
else {
return !FieldFilter.filter(absoluteName, includeFields, excludeFields).matched;
}
}
private Object[] readHitAsJson() {
// return results as raw json
Object[] result = new Object[2];
Object id = null;
Token t = parser.currentToken();
JsonResult snippet = new JsonResult();
// read everything until SOURCE or FIELDS is encountered
if (readMetadata) {
result[1] = snippet;
String name;
String absoluteName;
t = parser.nextToken();
// move parser
int metadataStartChar = parser.tokenCharOffset();
int metadataStopChar = -1;
int endCharOfLastElement = -1;
while ((t = parser.currentToken()) != null) {
name = parser.currentName();
absoluteName = StringUtils.stripFieldNameSourcePrefix(parser.absoluteName());
if (t == Token.FIELD_NAME) {
if (ID_FIELD.equals(name)) {
reader.beginField(absoluteName);
t = parser.nextToken();
id = reader.wrapString(parser.text());
endCharOfLastElement = parser.tokenCharOffset();
reader.endField(absoluteName);
t = parser.nextToken();
}
else if ("fields".equals(name) || "_source".equals(name)) {
metadataStopChar = endCharOfLastElement;
// break meta-parsing
t = parser.nextToken();
break;
}
else {
parser.skipChildren();
parser.nextToken();
t = parser.nextToken();
endCharOfLastElement = parser.tokenCharOffset();
}
}
else {
// no _source or field found
metadataStopChar = endCharOfLastElement;
//parser.nextToken();
// indicate no data found
t = null;
break;
}
}
Assert.notNull(id, "no id found");
result[0] = id;
if (metadataStartChar >= 0 && metadataStopChar >= 0) {
snippet.addMetadata(new JsonFragment(metadataStartChar, metadataStopChar));
}
}
// no metadata is needed, fast fwd
else {
Assert.notNull(ParsingUtils.seek(parser, ID), "no id found");
String absoluteName = StringUtils.stripFieldNameSourcePrefix(parser.absoluteName());
reader.beginField(absoluteName);
result[0] = reader.wrapString(parser.text());
reader.endField(absoluteName);
t = ParsingUtils.seek(parser, SOURCE, FIELDS);
}
// no fields found
if (t != null) {
// move past _source or fields field name to get the accurate token location
t = parser.nextToken();
switch (t) {
case FIELD_NAME:
int charStart = parser.tokenCharOffset();
// can't use skipChildren as we are within the object
ParsingUtils.skipCurrentBlock(parser);
// make sure to include the ending char
int charStop = parser.tokenCharOffset();
// move pass end of object
t = parser.nextToken();
snippet.addDoc(new JsonFragment(charStart, charStop));
break;
case END_OBJECT:
// move pass end of object
t = parser.nextToken();
snippet.addDoc(JsonFragment.EMPTY);
break;
default:
throw new EsHadoopIllegalArgumentException("unexpected token in _source: " + t);
}
}
// should include , plus whatever whitespace there is
int metadataSuffixStartCharPos = parser.tokenCharOffset();
int metadataSuffixStopCharPos = -1;
// in case of additional fields (matched_query), add them to the metadata
while ((t = parser.currentToken()) == Token.FIELD_NAME) {
t = parser.nextToken();
ParsingUtils.skipCurrentBlock(parser);
t = parser.nextToken();
if (readMetadata) {
metadataSuffixStopCharPos = parser.tokenCharOffset();
}
}
if (readMetadata) {
if (metadataSuffixStartCharPos >= 0 && metadataSuffixStopCharPos >= 0) {
snippet.addMetadata(new JsonFragment(metadataSuffixStartCharPos, metadataSuffixStopCharPos));
}
}
result[1] = snippet;
if (trace) {
log.trace(String.format("Read hit result [%s]", result));
}
return result;
}
private long hitsTotal() {
ParsingUtils.seek(parser, TOTAL);
long hits = parser.longValue();
return hits;
}
protected Object read(String fieldName, Token t, String fieldMapping) {
if (t == Token.START_ARRAY) {
return list(fieldName, fieldMapping);
}
// handle nested nodes first
else if (t == Token.START_OBJECT) {
return map(fieldMapping);
}
FieldType esType = mapping(fieldMapping);
if (t.isValue()) {
String rawValue = parser.text();
try {
return parseValue(esType);
} catch (Exception ex) {
throw new EsHadoopParsingException(String.format(Locale.ROOT, "Cannot parse value [%s] for field [%s]", rawValue, fieldName), ex);
}
}
return null;
}
private Object parseValue(FieldType esType) {
Object obj;
// special case of handing null (as text() will return "null")
if (parser.currentToken() == Token.VALUE_NULL) {
obj = null;
}
else {
obj = reader.readValue(parser, parser.text(), esType);
}
parser.nextToken();
return obj;
}
protected Object list(String fieldName, String fieldMapping) {
Token t = parser.currentToken();
if (t == null) {
t = parser.nextToken();
}
if (t == Token.START_ARRAY) {
t = parser.nextToken();
}
Object array = reader.createArray(mapping(fieldMapping));
// create only one element since with fields, we always get arrays which create unneeded allocations
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