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Protempa Framework is the core of Protempa.
package org.protempa.dest.keyloader;
/*
* #%L
* Protempa Framework
* %%
* Copyright (C) 2012 - 2014 Emory University
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.protempa.DataSource;
import org.protempa.DataSourceWriteException;
import org.protempa.KnowledgeSource;
import org.protempa.PropositionDefinition;
import org.protempa.dest.AbstractQueryResultsHandler;
import org.protempa.dest.QueryResultsHandlerProcessingException;
import org.protempa.proposition.Proposition;
import org.protempa.proposition.UniqueId;
/**
*
* @author Andrew Post
*/
public class KeyLoaderQueryResultsHandler extends AbstractQueryResultsHandler {
private final DataSource dataSource;
private final Criteria criteria;
private final KnowledgeSource knowledgeSource;
private final int batchSize = 1000;
private final String id;
private final String displayName;
private int i;
private Set keyIds;
KeyLoaderQueryResultsHandler(DataSource dataSource, KnowledgeSource knowledgeSource, Criteria criteria, String id, String displayName) {
if (dataSource == null) {
throw new IllegalArgumentException("dataSource cannot be null");
}
if (knowledgeSource == null) {
throw new IllegalArgumentException("dataSource cannot be null");
}
this.dataSource = dataSource;
this.knowledgeSource = knowledgeSource;
this.criteria = criteria;
this.id = id;
this.displayName = displayName;
}
@Override
public String getDisplayName() {
return this.displayName != null ? this.displayName : super.getDisplayName();
}
@Override
public String getId() {
return this.id != null ? this.id : super.getId();
}
@Override
public void start(Collection cache) throws QueryResultsHandlerProcessingException {
try {
this.dataSource.deleteAllKeys();
} catch (DataSourceWriteException ex) {
throw new QueryResultsHandlerProcessingException("Could not delete keys", ex);
}
try {
this.criteria.init(this.knowledgeSource);
} catch (CriteriaInitException ex) {
throw new QueryResultsHandlerProcessingException("Error setting up query results handler", ex);
}
this.i = 0;
this.keyIds = new HashSet<>();
}
@Override
public void handleQueryResult(String keyId, List propositions, Map> forwardDerivations, Map> backwardDerivations, Map references) throws QueryResultsHandlerProcessingException {
try {
if (this.criteria == null || this.criteria.evaluate(propositions)) {
i++;
if (this.i % this.batchSize == 0) {
this.dataSource.writeKeys(this.keyIds);
this.keyIds = new HashSet<>();
} else {
this.keyIds.add(keyId);
}
}
} catch (CriteriaEvaluateException | DataSourceWriteException ex) {
throw new QueryResultsHandlerProcessingException("Error processing query results", ex);
}
}
@Override
public void finish() throws QueryResultsHandlerProcessingException {
if (!this.keyIds.isEmpty()) {
try {
this.dataSource.writeKeys(this.keyIds);
} catch (DataSourceWriteException ex) {
throw new QueryResultsHandlerProcessingException(ex);
}
}
}
}