ucar.nc2.internal.dataset.conv.UnidataObsConvention Maven / Gradle / Ivy
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/*
* Copyright (c) 1998-2020 John Caron and University Corporation for Atmospheric Research/Unidata
* See LICENSE for license information.
*/
package ucar.nc2.internal.dataset.conv;
import java.io.IOException;
import java.util.StringTokenizer;
import ucar.nc2.Attribute;
import ucar.nc2.Variable;
import ucar.nc2.constants.AxisType;
import ucar.nc2.constants.CF;
import ucar.nc2.constants._Coordinate;
import ucar.nc2.dataset.NetcdfDataset;
import ucar.nc2.dataset.VariableDS;
import ucar.nc2.dataset.spi.CoordSystemBuilderFactory;
import ucar.nc2.internal.dataset.CoordSystemBuilder;
import ucar.nc2.units.SimpleUnit;
import ucar.nc2.util.CancelTask;
/**
* Unidata Observation Dataset v1.0
* Obsolete, do not use for new data.
*
* @see "https://web.archive.org/web/20130713015813/www.unidata.ucar.edu/software/netcdf-java/formats/UnidataObsConvention.html"
*/
public class UnidataObsConvention extends CoordSystemBuilder {
private static final String CONVENTION_NAME = "Unidata Observation Dataset v1.0";
public static class Factory implements CoordSystemBuilderFactory {
@Override
public String getConventionName() {
return CONVENTION_NAME;
}
@Override
public CoordSystemBuilder open(NetcdfDataset.Builder datasetBuilder) {
return new UnidataObsConvention(datasetBuilder);
}
}
UnidataObsConvention(NetcdfDataset.Builder datasetBuilder) {
super(datasetBuilder);
this.conventionName = CONVENTION_NAME;
}
@Override
protected void augmentDataset(CancelTask cancelTask) throws IOException {
if (!hasAxisType(AxisType.Lat)) { // already has _CoordinateAxisType
if (!addAxisType("latitude", AxisType.Lat)) { // directly named
String vname = rootGroup.getAttributeContainer().findAttributeString("latitude_coordinate", null);
if (!addAxisType(vname, AxisType.Lat)) { // attribute named
Variable.Builder v = hasUnits("degrees_north,degrees_N,degreesN,degree_north,degree_N,degreeN");
if (v != null)
addAxisType(v, AxisType.Lat); // CF-1
}
}
}
// longitude
if (!hasAxisType(AxisType.Lon)) { // already has _CoordinateAxisType
if (!addAxisType("longitude", AxisType.Lon)) { // directly named
String vname = rootGroup.getAttributeContainer().findAttributeString("longitude_coordinate", null);
if (!addAxisType(vname, AxisType.Lon)) { // attribute named
Variable.Builder v = hasUnits("degrees_east,degrees_E,degreesE,degree_east,degree_E,degreeE");
if (v != null)
addAxisType(v, AxisType.Lon); // CF-1
}
}
}
// altitude
if (!hasAxisType(AxisType.Height)) { // already has _CoordinateAxisType
if (!addAxisType("altitude", AxisType.Height)) { // directly named
if (!addAxisType("depth", AxisType.Height)) { // directly named
String vname = rootGroup.getAttributeContainer().findAttributeString("altitude_coordinate", null);
if (!addAxisType(vname, AxisType.Height)) { // attribute named
for (Variable.Builder v : rootGroup.vbuilders) {
String positive = v.getAttributeContainer().findAttributeString(CF.POSITIVE, null);
if (positive != null) {
addAxisType(v, AxisType.Height); // CF-1
break;
}
}
}
}
}
}
// time
if (!hasAxisType(AxisType.Time)) { // already has _CoordinateAxisType
if (!addAxisType("time", AxisType.Time)) { // directly named
String vname = rootGroup.getAttributeContainer().findAttributeString("time_coordinate", null);
if (!addAxisType(vname, AxisType.Time)) { // attribute named
for (Variable.Builder v : rootGroup.vbuilders) {
String unit = ((VariableDS.Builder) v).getUnits();
if (unit == null)
continue;
if (SimpleUnit.isDateUnit(unit)) {
addAxisType(v, AxisType.Time); // CF-1
break;
}
}
}
}
}
}
private boolean hasAxisType(AxisType a) {
for (Variable.Builder v : rootGroup.vbuilders) {
String axisType = v.getAttributeContainer().findAttributeString("CoordinateAxisType", null);
if ((axisType != null) && axisType.equals(a.toString()))
return true;
}
return false;
}
private VariableDS.Builder hasUnits(String unitList) {
StringTokenizer stoker = new StringTokenizer(unitList, ",");
while (stoker.hasMoreTokens()) {
String unit = stoker.nextToken();
for (Variable.Builder v : rootGroup.vbuilders) {
VariableDS.Builder ve = (VariableDS.Builder) v;
String hasUnit = ve.getUnits();
if (hasUnit == null)
continue;
if (hasUnit.equalsIgnoreCase(unit))
return ve;
}
}
return null;
}
private boolean addAxisType(String vname, AxisType a) {
if (vname == null)
return false;
rootGroup.findVariableLocal(vname)
.ifPresent(v -> v.addAttribute(new Attribute(_Coordinate.AxisType, a.toString())));
return rootGroup.findVariableLocal(vname).isPresent();
}
private void addAxisType(Variable.Builder v, AxisType a) {
v.addAttribute(new Attribute(_Coordinate.AxisType, a.toString()));
}
}
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