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The IO bundle for Geneweaver.
/*-
*
* Copyright 2018, 2020 The Jackson Laboratory Inc.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
* @author Matthew Gerring
*/
package org.geneweaver.domain;
import java.util.Objects;
import javax.annotation.processing.Generated;
import org.neo4j.ogm.annotation.EndNode;
import org.neo4j.ogm.annotation.GeneratedValue;
import org.neo4j.ogm.annotation.Id;
import org.neo4j.ogm.annotation.RelationshipEntity;
import org.neo4j.ogm.annotation.StartNode;
@Generated("POJO")
@RelationshipEntity(type = "TRACKED")
public class Tracked extends AbstractEntity {
/** The gene. */
@StartNode
private Track track;
/** The transcript. */
@EndNode
private Peak peak;
private String chr;
public Tracked() {
}
public Tracked(Peak peak, Track track) {
this.peak = peak;
this.track = track;
this.chr = peak.getChr();
}
/**
* @return the track
*/
public Track getTrack() {
return track;
}
/**
* @param track the track to set
*/
public void setTrack(Track track) {
this.track = track;
}
/**
* @return the region
*/
public Peak getRegion() {
return peak;
}
/**
* @param peak the region to set
*/
public void setRegion(Peak peak) {
this.peak = peak;
}
/**
* To string.
*
* @return the string
*/
@Override
public String toString() {
String tname = track!=null ? track.getName() : null;
String rname = peak!=null ? peak.getName() : null;
return tname+"-[TRACKED]->"+rname;
}
@Override
public int hashCode() {
final int prime = 31;
int result = super.hashCode();
result = prime * result + Objects.hash(peak, track);
return result;
}
@Override
public boolean equals(Object obj) {
if (this == obj)
return true;
if (!super.equals(obj))
return false;
if (!(obj instanceof Tracked))
return false;
Tracked other = (Tracked) obj;
return Objects.equals(peak, other.peak) && Objects.equals(track, other.track);
}
/**
* @return the chr
*/
public String getChr() {
return chr;
}
/**
* @param chr the chr to set
*/
public void setChr(String chr) {
this.chr = chr;
}
}