org.github.evenjn.align.alphabet.TupleAlignmentAlphabetBuilder Maven / Gradle / Ivy

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Stochastic machinery.

There is a newer version: 0.6.0

/**
 *
 * Copyright 2016 Marco Trevisan
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 * 
 */
package org.github.evenjn.align.alphabet;

import java.util.function.Consumer;
import java.util.function.Function;

import org.github.evenjn.yarn.Cursable;
import org.github.evenjn.yarn.Di;
import org.github.evenjn.yarn.Hook;
import org.github.evenjn.yarn.ProgressSpawner;
import org.github.evenjn.yarn.Tuple;

public interface TupleAlignmentAlphabetBuilder {

	TupleAlignmentAlphabet build(
			Cursable, Tuple>> data,
			ProgressSpawner progress_spawner );
	
	void setPrinters(
			Function> logger,
			Function a_printer,
			Function b_printer );

	void setMinMax( int min, int max );
}