org.glowroot.shaded.h2.tools.Csv Maven / Gradle / Ivy
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/*
* Copyright 2004-2013 H2 Group. Multiple-Licensed under the H2 License,
* Version 1.0, and under the Eclipse Public License, Version 1.0
* (http://h2database.com/html/license.html).
* Initial Developer: H2 Group
*/
package org.glowroot.shaded.h2.tools;
import java.io.BufferedInputStream;
import java.io.BufferedOutputStream;
import java.io.BufferedReader;
import java.io.BufferedWriter;
import java.io.IOException;
import java.io.InputStream;
import java.io.InputStreamReader;
import java.io.OutputStream;
import java.io.OutputStreamWriter;
import java.io.Reader;
import java.io.Writer;
import java.sql.Connection;
import java.sql.ResultSet;
import java.sql.ResultSetMetaData;
import java.sql.SQLException;
import java.sql.Statement;
import java.sql.Types;
import java.util.ArrayList;
import org.glowroot.shaded.h2.api.ErrorCode;
import org.glowroot.shaded.h2.engine.Constants;
import org.glowroot.shaded.h2.engine.SysProperties;
import org.glowroot.shaded.h2.message.DbException;
import org.glowroot.shaded.h2.store.fs.FileUtils;
import org.glowroot.shaded.h2.util.IOUtils;
import org.glowroot.shaded.h2.util.JdbcUtils;
import org.glowroot.shaded.h2.util.New;
import org.glowroot.shaded.h2.util.StringUtils;
/**
* A facility to read from and write to CSV (comma separated values) files. When
* reading, the BOM (the byte-order-mark) character 0xfeff at the beginning of
* the file is ignored.
*
* @author Thomas Mueller, Sylvain Cuaz
*/
public class Csv implements SimpleRowSource {
private String[] columnNames;
private String characterSet = SysProperties.FILE_ENCODING;
private char escapeCharacter = '\"';
private char fieldDelimiter = '\"';
private char fieldSeparatorRead = ',';
private String fieldSeparatorWrite = ",";
private boolean caseSensitiveColumnNames;
private boolean preserveWhitespace;
private boolean writeColumnHeader = true;
private char lineComment;
private String lineSeparator = SysProperties.LINE_SEPARATOR;
private String nullString = "";
private String rowSeparatorWrite;
private String fileName;
private Reader input;
private char[] inputBuffer;
private int inputBufferPos;
private int inputBufferStart = -1;
private int inputBufferEnd;
private Writer output;
private boolean endOfLine, endOfFile;
private int writeResultSet(ResultSet rs) throws SQLException {
try {
int rows = 0;
ResultSetMetaData meta = rs.getMetaData();
int columnCount = meta.getColumnCount();
String[] row = new String[columnCount];
int[] sqlTypes = new int[columnCount];
for (int i = 0; i < columnCount; i++) {
row[i] = meta.getColumnLabel(i + 1);
sqlTypes[i] = meta.getColumnType(i + 1);
}
if (writeColumnHeader) {
writeRow(row);
}
while (rs.next()) {
for (int i = 0; i < columnCount; i++) {
Object o;
switch (sqlTypes[i]) {
case Types.DATE:
o = rs.getDate(i + 1);
break;
case Types.TIME:
o = rs.getTime(i + 1);
break;
case Types.TIMESTAMP:
o = rs.getTimestamp(i + 1);
break;
default:
o = rs.getString(i + 1);
}
row[i] = o == null ? null : o.toString();
}
writeRow(row);
rows++;
}
output.close();
return rows;
} catch (IOException e) {
throw DbException.convertIOException(e, null);
} finally {
close();
JdbcUtils.closeSilently(rs);
}
}
/**
* Writes the result set to a file in the CSV format.
*
* @param writer the writer
* @param rs the result set
* @return the number of rows written
*/
public int write(Writer writer, ResultSet rs) throws SQLException {
this.output = writer;
return writeResultSet(rs);
}
/**
* Writes the result set to a file in the CSV format. The result set is read
* using the following loop:
*
*
* while (rs.next()) {
* writeRow(row);
* }
*
*
* @param outputFileName the name of the csv file
* @param rs the result set - the result set must be positioned before the
* first row.
* @param charset the charset or null to use the system default charset
* (see system property file.encoding)
* @return the number of rows written
*/
public int write(String outputFileName, ResultSet rs, String charset)
throws SQLException {
init(outputFileName, charset);
try {
initWrite();
return writeResultSet(rs);
} catch (IOException e) {
throw convertException("IOException writing " + outputFileName, e);
}
}
/**
* Writes the result set of a query to a file in the CSV format.
*
* @param conn the connection
* @param outputFileName the file name
* @param sql the query
* @param charset the charset or null to use the system default charset
* (see system property file.encoding)
* @return the number of rows written
*/
public int write(Connection conn, String outputFileName, String sql,
String charset) throws SQLException {
Statement stat = conn.createStatement();
ResultSet rs = stat.executeQuery(sql);
int rows = write(outputFileName, rs, charset);
stat.close();
return rows;
}
/**
* Reads from the CSV file and returns a result set. The rows in the result
* set are created on demand, that means the file is kept open until all
* rows are read or the result set is closed.
*
* If the columns are read from the CSV file, then the following rules are
* used: columns names that start with a letter or '_', and only
* contain letters, '_', and digits, are considered case insensitive
* and are converted to uppercase. Other column names are considered
* case sensitive (that means they need to be quoted when accessed).
*
* @param inputFileName the file name
* @param colNames or null if the column names should be read from the CSV
* file
* @param charset the charset or null to use the system default charset
* (see system property file.encoding)
* @return the result set
*/
public ResultSet read(String inputFileName, String[] colNames,
String charset) throws SQLException {
init(inputFileName, charset);
try {
return readResultSet(colNames);
} catch (IOException e) {
throw convertException("IOException reading " + inputFileName, e);
}
}
/**
* Reads CSV data from a reader and returns a result set. The rows in the
* result set are created on demand, that means the reader is kept open
* until all rows are read or the result set is closed.
*
* @param reader the reader
* @param colNames or null if the column names should be read from the CSV
* file
* @return the result set
*/
public ResultSet read(Reader reader, String[] colNames) throws IOException {
init(null, null);
this.input = reader;
return readResultSet(colNames);
}
private ResultSet readResultSet(String[] colNames) throws IOException {
this.columnNames = colNames;
initRead();
SimpleResultSet result = new SimpleResultSet(this);
makeColumnNamesUnique();
for (String columnName : columnNames) {
result.addColumn(columnName, Types.VARCHAR, Integer.MAX_VALUE, 0);
}
return result;
}
private void makeColumnNamesUnique() {
for (int i = 0; i < columnNames.length; i++) {
StringBuilder buff = new StringBuilder();
String n = columnNames[i];
if (n == null || n.length() == 0) {
buff.append('C').append(i + 1);
} else {
buff.append(n);
}
for (int j = 0; j < i; j++) {
String y = columnNames[j];
if (buff.toString().equals(y)) {
buff.append('1');
j = -1;
}
}
columnNames[i] = buff.toString();
}
}
private void init(String newFileName, String charset) {
this.fileName = newFileName;
if (charset != null) {
this.characterSet = charset;
}
}
private void initWrite() throws IOException {
if (output == null) {
try {
OutputStream out = FileUtils.newOutputStream(fileName, false);
out = new BufferedOutputStream(out, Constants.IO_BUFFER_SIZE);
output = new BufferedWriter(new OutputStreamWriter(out, characterSet));
} catch (Exception e) {
close();
throw DbException.convertToIOException(e);
}
}
}
private void writeRow(String[] values) throws IOException {
for (int i = 0; i < values.length; i++) {
if (i > 0) {
if (fieldSeparatorWrite != null) {
output.write(fieldSeparatorWrite);
}
}
String s = values[i];
if (s != null) {
if (escapeCharacter != 0) {
if (fieldDelimiter != 0) {
output.write(fieldDelimiter);
}
output.write(escape(s));
if (fieldDelimiter != 0) {
output.write(fieldDelimiter);
}
} else {
output.write(s);
}
} else if (nullString != null && nullString.length() > 0) {
output.write(nullString);
}
}
if (rowSeparatorWrite != null) {
output.write(rowSeparatorWrite);
}
output.write(lineSeparator);
}
private String escape(String data) {
if (data.indexOf(fieldDelimiter) < 0) {
if (escapeCharacter == fieldDelimiter || data.indexOf(escapeCharacter) < 0) {
return data;
}
}
int length = data.length();
StringBuilder buff = new StringBuilder(length);
for (int i = 0; i < length; i++) {
char ch = data.charAt(i);
if (ch == fieldDelimiter || ch == escapeCharacter) {
buff.append(escapeCharacter);
}
buff.append(ch);
}
return buff.toString();
}
private void initRead() throws IOException {
if (input == null) {
try {
InputStream in = FileUtils.newInputStream(fileName);
in = new BufferedInputStream(in, Constants.IO_BUFFER_SIZE);
input = new InputStreamReader(in, characterSet);
} catch (IOException e) {
close();
throw e;
}
}
if (!input.markSupported()) {
input = new BufferedReader(input);
}
input.mark(1);
int bom = input.read();
if (bom != 0xfeff) {
// Microsoft Excel compatibility
// ignore pseudo-BOM
input.reset();
}
inputBuffer = new char[Constants.IO_BUFFER_SIZE * 2];
if (columnNames == null) {
readHeader();
}
}
private void readHeader() throws IOException {
ArrayList list = New.arrayList();
while (true) {
String v = readValue();
if (v == null) {
if (endOfLine) {
if (endOfFile || list.size() > 0) {
break;
}
} else {
v = "COLUMN" + list.size();
list.add(v);
}
} else {
if (v.length() == 0) {
v = "COLUMN" + list.size();
} else if (!caseSensitiveColumnNames && isSimpleColumnName(v)) {
v = v.toUpperCase();
}
list.add(v);
if (endOfLine) {
break;
}
}
}
columnNames = new String[list.size()];
list.toArray(columnNames);
}
private static boolean isSimpleColumnName(String columnName) {
for (int i = 0, length = columnName.length(); i < length; i++) {
char ch = columnName.charAt(i);
if (i == 0) {
if (ch != '_' && !Character.isLetter(ch)) {
return false;
}
} else {
if (ch != '_' && !Character.isLetterOrDigit(ch)) {
return false;
}
}
}
if (columnName.length() == 0) {
return false;
}
return true;
}
private void pushBack() {
inputBufferPos--;
}
private int readChar() throws IOException {
if (inputBufferPos >= inputBufferEnd) {
return readBuffer();
}
return inputBuffer[inputBufferPos++];
}
private int readBuffer() throws IOException {
if (endOfFile) {
return -1;
}
int keep;
if (inputBufferStart >= 0) {
keep = inputBufferPos - inputBufferStart;
if (keep > 0) {
char[] src = inputBuffer;
if (keep + Constants.IO_BUFFER_SIZE > src.length) {
inputBuffer = new char[src.length * 2];
}
System.arraycopy(src, inputBufferStart, inputBuffer, 0, keep);
}
inputBufferStart = 0;
} else {
keep = 0;
}
inputBufferPos = keep;
int len = input.read(inputBuffer, keep, Constants.IO_BUFFER_SIZE);
if (len == -1) {
// ensure bufferPos > bufferEnd
// even after pushBack
inputBufferEnd = -1024;
endOfFile = true;
// ensure the right number of characters are read
// in case the input buffer is still used
inputBufferPos++;
return -1;
}
inputBufferEnd = keep + len;
return inputBuffer[inputBufferPos++];
}
private String readValue() throws IOException {
endOfLine = false;
inputBufferStart = inputBufferPos;
while (true) {
int ch = readChar();
if (ch == fieldDelimiter) {
// delimited value
boolean containsEscape = false;
inputBufferStart = inputBufferPos;
int sep;
while (true) {
ch = readChar();
if (ch == fieldDelimiter) {
ch = readChar();
if (ch != fieldDelimiter) {
sep = 2;
break;
}
containsEscape = true;
} else if (ch == escapeCharacter) {
ch = readChar();
if (ch < 0) {
sep = 1;
break;
}
containsEscape = true;
} else if (ch < 0) {
sep = 1;
break;
}
}
String s = new String(inputBuffer,
inputBufferStart, inputBufferPos - inputBufferStart - sep);
if (containsEscape) {
s = unEscape(s);
}
inputBufferStart = -1;
while (true) {
if (ch == fieldSeparatorRead) {
break;
} else if (ch == '\n' || ch < 0 || ch == '\r') {
endOfLine = true;
break;
} else if (ch == ' ' || ch == '\t') {
// ignore
} else {
pushBack();
break;
}
ch = readChar();
}
return s;
} else if (ch == '\n' || ch < 0 || ch == '\r') {
endOfLine = true;
return null;
} else if (ch == fieldSeparatorRead) {
// null
return null;
} else if (ch <= ' ') {
// ignore spaces
continue;
} else if (lineComment != 0 && ch == lineComment) {
// comment until end of line
inputBufferStart = -1;
while (true) {
ch = readChar();
if (ch == '\n' || ch < 0 || ch == '\r') {
break;
}
}
endOfLine = true;
return null;
} else {
// un-delimited value
while (true) {
ch = readChar();
if (ch == fieldSeparatorRead) {
break;
} else if (ch == '\n' || ch < 0 || ch == '\r') {
endOfLine = true;
break;
}
}
String s = new String(inputBuffer,
inputBufferStart, inputBufferPos - inputBufferStart - 1);
if (!preserveWhitespace) {
s = s.trim();
}
inputBufferStart = -1;
// check un-delimited value for nullString
return readNull(s);
}
}
}
private String readNull(String s) {
return s.equals(nullString) ? null : s;
}
private String unEscape(String s) {
StringBuilder buff = new StringBuilder(s.length());
int start = 0;
char[] chars = null;
while (true) {
int idx = s.indexOf(escapeCharacter, start);
if (idx < 0) {
idx = s.indexOf(fieldDelimiter, start);
if (idx < 0) {
break;
}
}
if (chars == null) {
chars = s.toCharArray();
}
buff.append(chars, start, idx - start);
if (idx == s.length() - 1) {
start = s.length();
break;
}
buff.append(chars[idx + 1]);
start = idx + 2;
}
buff.append(s.substring(start));
return buff.toString();
}
/**
* INTERNAL
*/
@Override
public Object[] readRow() throws SQLException {
if (input == null) {
return null;
}
String[] row = new String[columnNames.length];
try {
int i = 0;
while (true) {
String v = readValue();
if (v == null) {
if (endOfLine) {
if (i == 0) {
if (endOfFile) {
return null;
}
// empty line
continue;
}
break;
}
}
if (i < row.length) {
row[i++] = v;
}
if (endOfLine) {
break;
}
}
} catch (IOException e) {
throw convertException("IOException reading from " + fileName, e);
}
return row;
}
private static SQLException convertException(String message, Exception e) {
return DbException.get(ErrorCode.IO_EXCEPTION_1, e, message).getSQLException();
}
/**
* INTERNAL
*/
@Override
public void close() {
IOUtils.closeSilently(input);
input = null;
IOUtils.closeSilently(output);
output = null;
}
/**
* INTERNAL
*/
@Override
public void reset() throws SQLException {
throw new SQLException("Method is not supported", "CSV");
}
/**
* Override the field separator for writing. The default is ",".
*
* @param fieldSeparatorWrite the field separator
*/
public void setFieldSeparatorWrite(String fieldSeparatorWrite) {
this.fieldSeparatorWrite = fieldSeparatorWrite;
}
/**
* Get the current field separator for writing.
*
* @return the field separator
*/
public String getFieldSeparatorWrite() {
return fieldSeparatorWrite;
}
/**
* Override the case sensitive column names setting. The default is false.
* If enabled, the case of all column names is always preserved.
*
* @param caseSensitiveColumnNames whether column names are case sensitive
*/
public void setCaseSensitiveColumnNames(boolean caseSensitiveColumnNames) {
this.caseSensitiveColumnNames = caseSensitiveColumnNames;
}
/**
* Get the current case sensitive column names setting.
*
* @return whether column names are case sensitive
*/
public boolean getCaseSensitiveColumnNames() {
return caseSensitiveColumnNames;
}
/**
* Override the field separator for reading. The default is ','.
*
* @param fieldSeparatorRead the field separator
*/
public void setFieldSeparatorRead(char fieldSeparatorRead) {
this.fieldSeparatorRead = fieldSeparatorRead;
}
/**
* Get the current field separator for reading.
*
* @return the field separator
*/
public char getFieldSeparatorRead() {
return fieldSeparatorRead;
}
/**
* Get the current row separator for writing.
*
* @return the row separator
*/
public String getRowSeparatorWrite() {
return rowSeparatorWrite;
}
/**
* Override the end-of-row marker for writing. The default is null. After
* writing the end-of-row marker, a line feed is written (\n or \r\n
* depending on the system settings).
*
* @param rowSeparatorWrite the row separator
*/
public void setRowSeparatorWrite(String rowSeparatorWrite) {
this.rowSeparatorWrite = rowSeparatorWrite;
}
/**
* Set the line comment character. The default is character code 0 (line
* comments are disabled).
*
* @param lineCommentCharacter the line comment character
*/
public void setLineCommentCharacter(char lineCommentCharacter) {
this.lineComment = lineCommentCharacter;
}
/**
* Get the line comment character.
*
* @return the line comment character, or 0 if disabled
*/
public char getLineCommentCharacter() {
return lineComment;
}
/**
* Set the field delimiter. The default is " (a double quote).
* The value 0 means no field delimiter is used.
*
* @param fieldDelimiter the field delimiter
*/
public void setFieldDelimiter(char fieldDelimiter) {
this.fieldDelimiter = fieldDelimiter;
}
/**
* Get the current field delimiter.
*
* @return the field delimiter
*/
public char getFieldDelimiter() {
return fieldDelimiter;
}
/**
* Set the escape character. The escape character is used to escape the
* field delimiter. This is needed if the data contains the field delimiter.
* The default escape character is " (a double quote), which is the same as
* the field delimiter. If the field delimiter and the escape character are
* both " (double quote), and the data contains a double quote, then an
* additional double quote is added. Example:
*
* Data: He said "Hello".
* Escape character: "
* Field delimiter: "
* CSV file: "He said ""Hello""."
*
* If the field delimiter is a double quote and the escape character is a
* backslash, then escaping is done similar to Java (however, only the field
* delimiter is escaped). Example:
*
* Data: He said "Hello".
* Escape character: \
* Field delimiter: "
* CSV file: "He said \"Hello\"."
*
* The value 0 means no escape character is used.
*
* @param escapeCharacter the escape character
*/
public void setEscapeCharacter(char escapeCharacter) {
this.escapeCharacter = escapeCharacter;
}
/**
* Get the current escape character.
*
* @return the escape character
*/
public char getEscapeCharacter() {
return escapeCharacter;
}
/**
* Set the line separator.
*
* @param lineSeparator the line separator
*/
public void setLineSeparator(String lineSeparator) {
this.lineSeparator = lineSeparator;
}
/**
* Get the current line separator.
*
* @return the line separator
*/
public String getLineSeparator() {
return lineSeparator;
}
/**
* Set the value that represents NULL. It is only used for non-delimited
* values.
*
* @param nullString the null
*/
public void setNullString(String nullString) {
this.nullString = nullString;
}
/**
* Get the current null string.
*
* @return the null string.
*/
public String getNullString() {
return nullString;
}
/**
* Enable or disable preserving whitespace in unquoted text.
*
* @param value the new value for the setting
*/
public void setPreserveWhitespace(boolean value) {
this.preserveWhitespace = value;
}
/**
* Whether whitespace in unquoted text is preserved.
*
* @return the current value for the setting
*/
public boolean getPreserveWhitespace() {
return preserveWhitespace;
}
/**
* Enable or disable writing the column header.
*
* @param value the new value for the setting
*/
public void setWriteColumnHeader(boolean value) {
this.writeColumnHeader = value;
}
/**
* Whether the column header is written.
*
* @return the current value for the setting
*/
public boolean getWriteColumnHeader() {
return writeColumnHeader;
}
/**
* INTERNAL.
* Parse and set the CSV options.
*
* @param options the the options
* @return the character set
*/
public String setOptions(String options) {
String charset = null;
String[] keyValuePairs = StringUtils.arraySplit(options, ' ', false);
for (String pair : keyValuePairs) {
if (pair.length() == 0) {
continue;
}
int index = pair.indexOf('=');
String key = StringUtils.trim(pair.substring(0, index), true, true, " ");
String value = pair.substring(index + 1);
char ch = value.length() == 0 ? 0 : value.charAt(0);
if (isParam(key, "escape", "esc", "escapeCharacter")) {
setEscapeCharacter(ch);
} else if (isParam(key, "fieldDelimiter", "fieldDelim")) {
setFieldDelimiter(ch);
} else if (isParam(key, "fieldSeparator", "fieldSep")) {
setFieldSeparatorRead(ch);
setFieldSeparatorWrite(value);
} else if (isParam(key, "lineComment", "lineCommentCharacter")) {
setLineCommentCharacter(ch);
} else if (isParam(key, "lineSeparator", "lineSep")) {
setLineSeparator(value);
} else if (isParam(key, "null", "nullString")) {
setNullString(value);
} else if (isParam(key, "rowSeparator", "rowSep")) {
setRowSeparatorWrite(value);
} else if (isParam(key, "charset", "characterSet")) {
charset = value;
} else if (isParam(key, "preserveWhitespace")) {
setPreserveWhitespace(Boolean.parseBoolean(value));
} else if (isParam(key, "writeColumnHeader")) {
setWriteColumnHeader(Boolean.parseBoolean(value));
} else if (isParam(key, "caseSensitiveColumnNames")) {
setCaseSensitiveColumnNames(Boolean.parseBoolean(value));
} else {
throw DbException.getUnsupportedException(key);
}
}
return charset;
}
private static boolean isParam(String key, String... values) {
for (String v : values) {
if (key.equalsIgnoreCase(v)) {
return true;
}
}
return false;
}
}