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GORpipe allows analysis of large sets of genomic and phenotypic tabular data using a declarative query language in a parallel execution engine

Files of the artifact gor-model version 4.3.2 from the group org.gorpipe.

Artifact gor-model
Group org.gorpipe
Version 4.3.2
Last update 01. November 2022
Tags: allows execution using large sets data query tabular language analysis phenotypic genomic parallel engine declarative gorpipe
Organization not specified
URL http://gorpipe.org
License GNU Affero General Public License
Dependencies amount 1
Dependencies scala-parser-combinators_2.12,
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Source code of gor-model version 4.3.2

META-INF
META-INF.META-INF.MANIFEST.MF
gorsat.Commands
gorsat.Commands.gorsat.Commands.Analysis.scala
gorsat.Commands.gorsat.Commands.BinAggregator.scala
gorsat.Commands.gorsat.Commands.BinAnalysis.scala
gorsat.Commands.gorsat.Commands.BinFactory.scala
gorsat.Commands.gorsat.Commands.BinIDgen.scala
gorsat.Commands.gorsat.Commands.BinInfo.scala
gorsat.Commands.gorsat.Commands.BinState.scala
gorsat.Commands.gorsat.Commands.ChromRowHandler.scala
gorsat.Commands.gorsat.Commands.CommandArguments.scala
gorsat.Commands.gorsat.Commands.CommandInfo.scala
gorsat.Commands.gorsat.Commands.CommandOptions.scala
gorsat.Commands.gorsat.Commands.CommandParseUtilities.scala
gorsat.Commands.gorsat.Commands.CommandParsingResult.scala
gorsat.Commands.gorsat.Commands.GenomeRowHandler.scala
gorsat.Commands.gorsat.Commands.GenomicRange.scala
gorsat.Commands.gorsat.Commands.GroupingColumnRowHandler.scala
gorsat.Commands.gorsat.Commands.InputSourceInfo.scala
gorsat.Commands.gorsat.Commands.InputSourceParsingResult.scala
gorsat.Commands.gorsat.Commands.Output.scala
gorsat.Commands.gorsat.Commands.ParsingErrata.scala
gorsat.Commands.gorsat.Commands.Processor.scala
gorsat.Commands.gorsat.Commands.RegularBinIDgen.scala
gorsat.Commands.gorsat.Commands.RegularRowHandler.scala
gorsat.Commands.gorsat.Commands.RowHandler.scala
gorsat.Commands.gorsat.Commands.RowHeader.scala
gorsat.Commands.gorsat.Commands.SlidingBinIDgen.scala
gorsat.Commands.gorsat.Commands.SlidingRowHandler.scala
gorsat
gorsat.gorsat.gorsatDynIterator.scala
gorsat.gorsatGorIterator
gorsat.gorsatGorIterator.gorsat.gorsatGorIterator.FileLineIterator.scala
gorsat.gorsatGorIterator.gorsat.gorsatGorIterator.MapAndListUtilities.scala
gorsat.gorsatGorIterator.gorsat.gorsatGorIterator.MemoryMonitorUtil.scala
gorsat.gorsatGorIterator.gorsat.gorsatGorIterator.gorsatGorIterator.scala
org.gorpipe.model.util
org.gorpipe.model.util.org.gorpipe.model.util.logging.properties
org.gorpipe.gor
org.gorpipe.gor.org.gorpipe.gor.ParseTiming
org.gorpipe.gor.binsearch
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.BlockPacker
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.BufferIterator
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.CompressionType
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.GorIndexFile
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.GorIndexType
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.GorSeekableIterator
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.GorZipLexOutputStream
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.GorzSeekableIterator
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.IKey
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.IRow
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.IRowSource
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.LexRow
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.Position
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.PositionCache
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.PositionCacheEntry
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.SeekableIterator
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.StringIntKey
org.gorpipe.gor.binsearch.org.gorpipe.gor.binsearch.Unzipper
org.gorpipe.gor.driver
org.gorpipe.gor.driver.org.gorpipe.gor.driver.DataSource
org.gorpipe.gor.driver.org.gorpipe.gor.driver.GorDriver
org.gorpipe.gor.driver.org.gorpipe.gor.driver.GorDriverConfig
org.gorpipe.gor.driver.org.gorpipe.gor.driver.GorDriverFactory
org.gorpipe.gor.driver.org.gorpipe.gor.driver.PluggableGorDriver
org.gorpipe.gor.driver.org.gorpipe.gor.driver.SourceProvider
org.gorpipe.gor.driver.adapters
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.BlockCompressedSeekableFile
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.OffsetStreamSourceSeekableFile
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.PersistentInputStream
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.PositionAwareInputStream
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.SamtoolsAdapter
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.StreamSourceRacFile
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.StreamSourceSeekableFile
org.gorpipe.gor.driver.adapters.org.gorpipe.gor.driver.adapters.StreamSourceSeekableStream
org.gorpipe.gor.driver.bgen
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.BGenOutputStream
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.BGenWriter
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.BGenWriterFactory
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.DataBlockFactory
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.GroupingBGenWriter
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.HardCallDataBlock
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.HardCallDataBlockFactory
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.ImputedDataBlock
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.ImputedDataBlockFactory
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.VariantDataBlock
org.gorpipe.gor.driver.bgen.org.gorpipe.gor.driver.bgen.VariantGrouper
org.gorpipe.gor.driver.bgenreader
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.BGenIterator
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.BitStream
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.DataBlockParserFactory
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.HeaderBlockParser
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.HeaderInfo
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.LayoutOneParser
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.LayoutTwoParser
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.Unzipper
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.Utils
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.VariantDataBlockParser
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.ZLibUnzipper
org.gorpipe.gor.driver.bgenreader.org.gorpipe.gor.driver.bgenreader.ZStdUnzipper
org.gorpipe.gor.driver.filters
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.AndFilter
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.EqFilter
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.InFilter
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.NotFilter
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.OrFilter
org.gorpipe.gor.driver.filters.org.gorpipe.gor.driver.filters.RowFilter
org.gorpipe.gor.driver.genotypeutilities
org.gorpipe.gor.driver.genotypeutilities.org.gorpipe.gor.driver.genotypeutilities.ValueColumnParsing
org.gorpipe.gor.driver.meta
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.DataType
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.FileNature
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.IndexableSourceReference
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.SourceMetadata
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.SourceReference
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.SourceReferenceBuilder
org.gorpipe.gor.driver.meta.org.gorpipe.gor.driver.meta.SourceType
org.gorpipe.gor.driver.pgen
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.BiAllelicHardCalls
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.BiAllelicHardCallsAndDosages
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.BitUtilities
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.DataTrackWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.DosageWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.FWHardCallsPGenOutputStream
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.FWUnPhasedPGenOutputStream
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.FixedWidthPGenOutputStream
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.GroupingPGenWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.HardCallRecordFactory
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.ImputedRecordFactory
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.MainTrackWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.MultiAllelicHardCalls
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.MultiAllelicHardCallsWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.MultiAllelicVariantRecord
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.PGenOutputStream
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.PGenWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.PGenWriterFactory
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.PVarWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.SimplePGenWriter
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.VariableWidthPGenOutputStream
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.VariantRecord
org.gorpipe.gor.driver.pgen.org.gorpipe.gor.driver.pgen.VariantRecordFactory
org.gorpipe.gor.driver.providers
org.gorpipe.gor.driver.providers.org.gorpipe.gor.driver.providers.SourceFile
org.gorpipe.gor.driver.providers.db
org.gorpipe.gor.driver.providers.db.org.gorpipe.gor.driver.providers.db.DbScope
org.gorpipe.gor.driver.providers.db.org.gorpipe.gor.driver.providers.db.DbSource
org.gorpipe.gor.driver.providers.db.org.gorpipe.gor.driver.providers.db.DbSourceProvider
org.gorpipe.gor.driver.providers.db.org.gorpipe.gor.driver.providers.db.DbSourceType
org.gorpipe.gor.driver.providers.gorserver
org.gorpipe.gor.driver.providers.gorserver.org.gorpipe.gor.driver.providers.gorserver.GorSource
org.gorpipe.gor.driver.providers.mem
org.gorpipe.gor.driver.providers.mem.org.gorpipe.gor.driver.providers.mem.MemGenomicIterator
org.gorpipe.gor.driver.providers.mem.org.gorpipe.gor.driver.providers.mem.MemSource
org.gorpipe.gor.driver.providers.mem.org.gorpipe.gor.driver.providers.mem.MemSourceProvider
org.gorpipe.gor.driver.providers.mem.org.gorpipe.gor.driver.providers.mem.MemSourceType
org.gorpipe.gor.driver.providers.simple
org.gorpipe.gor.driver.providers.simple.org.gorpipe.gor.driver.providers.simple.SimpleSource
org.gorpipe.gor.driver.providers.simple.org.gorpipe.gor.driver.providers.simple.SimpleSourceProvider
org.gorpipe.gor.driver.providers.simple.org.gorpipe.gor.driver.providers.simple.SimpleSourceType
org.gorpipe.gor.driver.providers.stream
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.FileCache
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.RequestRange
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.StreamSourceFile
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.StreamSourceIteratorFactory
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.StreamSourceProvider
org.gorpipe.gor.driver.providers.stream.org.gorpipe.gor.driver.providers.stream.StreamUtils
org.gorpipe.gor.driver.providers.stream.datatypes.bam
org.gorpipe.gor.driver.providers.stream.datatypes.bam.org.gorpipe.gor.driver.providers.stream.datatypes.bam.BamFile
org.gorpipe.gor.driver.providers.stream.datatypes.bam.org.gorpipe.gor.driver.providers.stream.datatypes.bam.BamFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.bam.org.gorpipe.gor.driver.providers.stream.datatypes.bam.BamFileIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.bam.org.gorpipe.gor.driver.providers.stream.datatypes.bam.BamIterator
org.gorpipe.gor.driver.providers.stream.datatypes.bgen
org.gorpipe.gor.driver.providers.stream.datatypes.bgen.org.gorpipe.gor.driver.providers.stream.datatypes.bgen.BGenFile
org.gorpipe.gor.driver.providers.stream.datatypes.bgen.org.gorpipe.gor.driver.providers.stream.datatypes.bgen.BGenFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.bgen.org.gorpipe.gor.driver.providers.stream.datatypes.bgen.BGenFileIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.cram
org.gorpipe.gor.driver.providers.stream.datatypes.cram.org.gorpipe.gor.driver.providers.stream.datatypes.cram.CramFile
org.gorpipe.gor.driver.providers.stream.datatypes.cram.org.gorpipe.gor.driver.providers.stream.datatypes.cram.CramFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.cram.org.gorpipe.gor.driver.providers.stream.datatypes.cram.CramFileIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.cram.org.gorpipe.gor.driver.providers.stream.datatypes.cram.CramIterator
org.gorpipe.gor.driver.providers.stream.datatypes.cram.org.gorpipe.gor.driver.providers.stream.datatypes.cram.CramUtils
org.gorpipe.gor.driver.providers.stream.datatypes.gor
org.gorpipe.gor.driver.providers.stream.datatypes.gor.org.gorpipe.gor.driver.providers.stream.datatypes.gor.GorFile
org.gorpipe.gor.driver.providers.stream.datatypes.gor.org.gorpipe.gor.driver.providers.stream.datatypes.gor.GorHeader
org.gorpipe.gor.driver.providers.stream.datatypes.gor.org.gorpipe.gor.driver.providers.stream.datatypes.gor.GorIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.gorgz
org.gorpipe.gor.driver.providers.stream.datatypes.gorgz.org.gorpipe.gor.driver.providers.stream.datatypes.gorgz.GorGzIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.gorgz.org.gorpipe.gor.driver.providers.stream.datatypes.gorgz.GorIndexedFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.gorp
org.gorpipe.gor.driver.providers.stream.datatypes.gorp.org.gorpipe.gor.driver.providers.stream.datatypes.gorp.GorpFile
org.gorpipe.gor.driver.providers.stream.datatypes.gorp.org.gorpipe.gor.driver.providers.stream.datatypes.gorp.GorpIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.gorz
org.gorpipe.gor.driver.providers.stream.datatypes.gorz.org.gorpipe.gor.driver.providers.stream.datatypes.gorz.GorzFile
org.gorpipe.gor.driver.providers.stream.datatypes.gorz.org.gorpipe.gor.driver.providers.stream.datatypes.gorz.GorzIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.parquet
org.gorpipe.gor.driver.providers.stream.datatypes.parquet.org.gorpipe.gor.driver.providers.stream.datatypes.parquet.NorParquetRowReader
org.gorpipe.gor.driver.providers.stream.datatypes.parquet.org.gorpipe.gor.driver.providers.stream.datatypes.parquet.ParquetFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.parquet.org.gorpipe.gor.driver.providers.stream.datatypes.parquet.ParquetIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.parquet.org.gorpipe.gor.driver.providers.stream.datatypes.parquet.ParquetRowReader
org.gorpipe.gor.driver.providers.stream.datatypes.tabix
org.gorpipe.gor.driver.providers.stream.datatypes.tabix.org.gorpipe.gor.driver.providers.stream.datatypes.tabix.TabixIndexedFile
org.gorpipe.gor.driver.providers.stream.datatypes.vcf
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfFile
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfGzFile
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfIndexedFileIterator
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfIteratorFactory
org.gorpipe.gor.driver.providers.stream.datatypes.vcf.org.gorpipe.gor.driver.providers.stream.datatypes.vcf.VcfSeekableIterator
org.gorpipe.gor.driver.providers.stream.sources
org.gorpipe.gor.driver.providers.stream.sources.org.gorpipe.gor.driver.providers.stream.sources.StreamSource
org.gorpipe.gor.driver.providers.stream.sources.org.gorpipe.gor.driver.providers.stream.sources.StreamSourceMetadata
org.gorpipe.gor.driver.providers.stream.sources.file
org.gorpipe.gor.driver.providers.stream.sources.file.org.gorpipe.gor.driver.providers.stream.sources.file.FileSource
org.gorpipe.gor.driver.providers.stream.sources.file.org.gorpipe.gor.driver.providers.stream.sources.file.FileSourceProvider
org.gorpipe.gor.driver.providers.stream.sources.file.org.gorpipe.gor.driver.providers.stream.sources.file.FileSourceType
org.gorpipe.gor.driver.providers.stream.sources.http
org.gorpipe.gor.driver.providers.stream.sources.http.org.gorpipe.gor.driver.providers.stream.sources.http.HTTPSource
org.gorpipe.gor.driver.providers.stream.sources.http.org.gorpipe.gor.driver.providers.stream.sources.http.HTTPSourceProvider
org.gorpipe.gor.driver.providers.stream.sources.http.org.gorpipe.gor.driver.providers.stream.sources.http.HTTPSourceType
org.gorpipe.gor.driver.providers.stream.sources.wrappers
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.CachedSourceWrapper
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.ExtendedRangeWrapper
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.FullRangeWrapper
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.RequestLoggingWrapper
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.RetryWrapper
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.WrappedDataSource
org.gorpipe.gor.driver.providers.stream.sources.wrappers.org.gorpipe.gor.driver.providers.stream.sources.wrappers.WrappedStreamSource
org.gorpipe.gor.driver.utils
org.gorpipe.gor.driver.utils.org.gorpipe.gor.driver.utils.CredentialClientCache
org.gorpipe.gor.driver.utils.org.gorpipe.gor.driver.utils.RetryHandler
org.gorpipe.gor.driver.utils.org.gorpipe.gor.driver.utils.TimeAdjustable
org.gorpipe.gor.driver.utils.org.gorpipe.gor.driver.utils.TimeUtils
org.gorpipe.gor.function
org.gorpipe.gor.function.org.gorpipe.gor.function.GorRowInferFunction
org.gorpipe.gor.model
org.gorpipe.gor.model.org.gorpipe.gor.model.AccessControlContext
org.gorpipe.gor.model.org.gorpipe.gor.model.BaseMeta
org.gorpipe.gor.model.org.gorpipe.gor.model.BoundedIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.ChrDataScheme
org.gorpipe.gor.model.org.gorpipe.gor.model.ChromoCache
org.gorpipe.gor.model.org.gorpipe.gor.model.ChromoLookup
org.gorpipe.gor.model.org.gorpipe.gor.model.ColumnValueProvider
org.gorpipe.gor.model.org.gorpipe.gor.model.Constants
org.gorpipe.gor.model.org.gorpipe.gor.model.ContigDataScheme
org.gorpipe.gor.model.org.gorpipe.gor.model.DbGenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.DbNorIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.DbSource
org.gorpipe.gor.model.org.gorpipe.gor.model.DefaultChromoLookup
org.gorpipe.gor.model.org.gorpipe.gor.model.DefaultEventLogger
org.gorpipe.gor.model.org.gorpipe.gor.model.DriverBackedFileReader
org.gorpipe.gor.model.org.gorpipe.gor.model.DriverBackedSecureFileReader
org.gorpipe.gor.model.org.gorpipe.gor.model.EmptyIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.FileReader
org.gorpipe.gor.model.org.gorpipe.gor.model.FilteredIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.GCRacFile
org.gorpipe.gor.model.org.gorpipe.gor.model.GenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.GenomicIteratorAdapterBase
org.gorpipe.gor.model.org.gorpipe.gor.model.GenomicIteratorBase
org.gorpipe.gor.model.org.gorpipe.gor.model.GorCommand
org.gorpipe.gor.model.org.gorpipe.gor.model.GorGzGenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.GorIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.GorMeta
org.gorpipe.gor.model.org.gorpipe.gor.model.GorOptions
org.gorpipe.gor.model.org.gorpipe.gor.model.GorParallelQueryHandler
org.gorpipe.gor.model.org.gorpipe.gor.model.GorpIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.Line
org.gorpipe.gor.model.org.gorpipe.gor.model.MergeIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.MonitorIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.NamedTableGorIterators
org.gorpipe.gor.model.org.gorpipe.gor.model.NoValidateRowBase
org.gorpipe.gor.model.org.gorpipe.gor.model.NorParquetLine
org.gorpipe.gor.model.org.gorpipe.gor.model.ParquetLine
org.gorpipe.gor.model.org.gorpipe.gor.model.PipeHeaderProvider
org.gorpipe.gor.model.org.gorpipe.gor.model.QueryEvaluator
org.gorpipe.gor.model.org.gorpipe.gor.model.QuoteSafeRowBase
org.gorpipe.gor.model.org.gorpipe.gor.model.RacFile
org.gorpipe.gor.model.org.gorpipe.gor.model.RacSeekableFile
org.gorpipe.gor.model.org.gorpipe.gor.model.RangeMergeIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.ReadListener
org.gorpipe.gor.model.org.gorpipe.gor.model.ReportCommand
org.gorpipe.gor.model.org.gorpipe.gor.model.RequiredColumn
org.gorpipe.gor.model.org.gorpipe.gor.model.ResourceMonitor
org.gorpipe.gor.model.org.gorpipe.gor.model.Row
org.gorpipe.gor.model.org.gorpipe.gor.model.RowBase
org.gorpipe.gor.model.org.gorpipe.gor.model.RowSourceStats
org.gorpipe.gor.model.org.gorpipe.gor.model.SeekableFile
org.gorpipe.gor.model.org.gorpipe.gor.model.SelectIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.SeqBasesGenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.SharedCachedReferenceSource
org.gorpipe.gor.model.org.gorpipe.gor.model.SharedChromSeqReferenceSource
org.gorpipe.gor.model.org.gorpipe.gor.model.SharedFastaReferenceSource
org.gorpipe.gor.model.org.gorpipe.gor.model.SourceRef
org.gorpipe.gor.model.org.gorpipe.gor.model.StdInGenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.TableModelIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.VcfGzGenomicIterator
org.gorpipe.gor.model.org.gorpipe.gor.model.VcfGzTabixGenomicIterator
org.gorpipe.gor.monitor
org.gorpipe.gor.monitor.org.gorpipe.gor.monitor.CancelMonitor
org.gorpipe.gor.monitor.org.gorpipe.gor.monitor.GorMonitor
org.gorpipe.gor.reference
org.gorpipe.gor.reference.org.gorpipe.gor.reference.ReferenceBuild
org.gorpipe.gor.reference.org.gorpipe.gor.reference.ReferenceBuildDefaults
org.gorpipe.gor.servers
org.gorpipe.gor.servers.org.gorpipe.gor.servers.GorConfig
org.gorpipe.gor.session
org.gorpipe.gor.session.org.gorpipe.gor.session.EventLogger
org.gorpipe.gor.session.org.gorpipe.gor.session.GenericFactory
org.gorpipe.gor.session.org.gorpipe.gor.session.GorContext
org.gorpipe.gor.session.org.gorpipe.gor.session.GorReportBuilder
org.gorpipe.gor.session.org.gorpipe.gor.session.GorRunner
org.gorpipe.gor.session.org.gorpipe.gor.session.GorRunnerFactory
org.gorpipe.gor.session.org.gorpipe.gor.session.GorScriptTask
org.gorpipe.gor.session.org.gorpipe.gor.session.GorSession
org.gorpipe.gor.session.org.gorpipe.gor.session.GorSessionCache
org.gorpipe.gor.session.org.gorpipe.gor.session.ProjectContext
org.gorpipe.gor.session.org.gorpipe.gor.session.SystemContext
org.gorpipe.gor.stats
org.gorpipe.gor.stats.org.gorpipe.gor.stats.StatsCollector
org.gorpipe.gor.table
org.gorpipe.gor.table.org.gorpipe.gor.table.BaseTable
org.gorpipe.gor.table.org.gorpipe.gor.table.Dictionary
org.gorpipe.gor.table.org.gorpipe.gor.table.Table
org.gorpipe.gor.table.org.gorpipe.gor.table.TableHeader
org.gorpipe.gor.table.org.gorpipe.gor.table.TableLog
org.gorpipe.gor.table.dictionary
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.BaseDictionaryTable
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.DefaultTableAccessOptimizer
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.DictionaryEntry
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.DictionaryRawEntry
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.DictionaryTable
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.DictionaryTableMeta
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.ITableEntries
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.TableAccessOptimizer
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.TableEntries
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.TableEntry
org.gorpipe.gor.table.dictionary.org.gorpipe.gor.table.dictionary.TableFilter
org.gorpipe.gor.table.lock
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.AcquireLockException
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.ExclusiveFileTableLock
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.NoTableLock
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.RenewableLockHelper
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.TableLock
org.gorpipe.gor.table.lock.org.gorpipe.gor.table.lock.TableTransaction
org.gorpipe.gor.table.util
org.gorpipe.gor.table.util.org.gorpipe.gor.table.util.GenomicRange
org.gorpipe.gor.table.util.org.gorpipe.gor.table.util.PathUtils
org.gorpipe.gor.util
org.gorpipe.gor.util.org.gorpipe.gor.util.ByteTextBuilder
org.gorpipe.gor.util.org.gorpipe.gor.util.DoubleArray
org.gorpipe.gor.util.org.gorpipe.gor.util.GLongHashMap
org.gorpipe.gor.util.org.gorpipe.gor.util.IntHashMap
org.gorpipe.gor.util.org.gorpipe.gor.util.NCGZIPInputStream
org.gorpipe.gor.util.org.gorpipe.gor.util.OptimalDistribution
org.gorpipe.gor.util.org.gorpipe.gor.util.StringUtil
org.gorpipe.gor.util.org.gorpipe.gor.util.Util
org.gorpipe.model.gor
org.gorpipe.model.gor.org.gorpipe.model.gor.BinaryHolder.scala
org.gorpipe.model.gor.org.gorpipe.model.gor.gorRow.scala
org.gorpipe.model.gor.org.gorpipe.model.gor.gorsatPipes.scala
org.gorpipe.model.gor.iterators
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.LineIterator.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeq.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeqFactory.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeqFromConfig.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeqFromConfigFactory.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeqRotating.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RefSeqRotatingFactory.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.RowSource.scala
org.gorpipe.model.gor.iterators.org.gorpipe.model.gor.iterators.TimedRowSource.scala




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