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JPMML class model evaluator
/*
* Copyright (c) 2013 Villu Ruusmann
*
* This file is part of JPMML-Evaluator
*
* JPMML-Evaluator is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* JPMML-Evaluator is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with JPMML-Evaluator. If not, see .
*/
package org.jpmml.evaluator;
import java.util.BitSet;
import java.util.List;
import java.util.Objects;
import org.dmg.pmml.BinarySimilarity;
import org.dmg.pmml.Chebychev;
import org.dmg.pmml.CityBlock;
import org.dmg.pmml.CompareFunction;
import org.dmg.pmml.ComparisonField;
import org.dmg.pmml.ComparisonMeasure;
import org.dmg.pmml.Distance;
import org.dmg.pmml.Euclidean;
import org.dmg.pmml.Jaccard;
import org.dmg.pmml.Measure;
import org.dmg.pmml.Minkowski;
import org.dmg.pmml.Similarity;
import org.dmg.pmml.SimpleMatching;
import org.dmg.pmml.SquaredEuclidean;
import org.dmg.pmml.Tanimoto;
public class MeasureUtil {
private MeasureUtil(){
}
static
public Measure ensureMeasure(ComparisonMeasure comparisonMeasure){
Measure measure = comparisonMeasure.getMeasure();
if(measure == null){
throw new MissingElementException(MissingElementException.formatMessage(XPathUtil.formatElement(comparisonMeasure.getClass()) + "/"), comparisonMeasure);
}
return measure;
}
static
public Value evaluateSimilarity(ValueFactory valueFactory, ComparisonMeasure comparisonMeasure, List extends ComparisonField>> comparisonFields, BitSet flags, BitSet referenceFlags){
Similarity measure = TypeUtil.cast(Similarity.class, comparisonMeasure.getMeasure());
int a11 = 0;
int a10 = 0;
int a01 = 0;
int a00 = 0;
for(int i = 0; i < comparisonFields.size(); i++){
if(flags.get(i)){
if(referenceFlags.get(i)){
a11 += 1;
} else
{
a10 += 1;
}
} else
{
if(referenceFlags.get(i)){
a01 += 1;
} else
{
a00 += 1;
}
}
}
Value numerator = valueFactory.newValue();
Value denominator = valueFactory.newValue();
if(measure instanceof SimpleMatching){
numerator.add(a11 + a00);
denominator.add(a11 + a10 + a01 + a00);
} else
if(measure instanceof Jaccard){
numerator.add(a11);
denominator.add(a11 + a10 + a01);
} else
if(measure instanceof Tanimoto){
numerator.add(a11 + a00);
denominator.add(a11).add(2d, (a10 + a01)).add(a00);
} else
if(measure instanceof BinarySimilarity){
BinarySimilarity binarySimilarity = (BinarySimilarity)measure;
numerator.add(binarySimilarity.getC11Parameter(), a11).add(binarySimilarity.getC10Parameter(), a10).add(binarySimilarity.getC01Parameter(), a01).add(binarySimilarity.getC00Parameter(), a00);
denominator.add(binarySimilarity.getD11Parameter(), a11).add(binarySimilarity.getD10Parameter(), a10).add(binarySimilarity.getD01Parameter(), a01).add(binarySimilarity.getD00Parameter(), a00);
} else
{
throw new UnsupportedElementException(measure);
} // End if
if(denominator.equals(0d)){
throw new UndefinedResultException();
}
return numerator.divide(denominator);
}
static
public BitSet toBitSet(List values){
BitSet result = new BitSet(values.size());
for(int i = 0; i < values.size(); i++){
FieldValue value = values.get(i);
if((FieldValues.CONTINUOUS_DOUBLE_ZERO).equalsValue(value)){
result.set(i, false);
} else
if((FieldValues.CONTINUOUS_DOUBLE_ONE).equalsValue(value)){
result.set(i, true);
} else
{
throw new EvaluationException("Expected " + PMMLException.formatValue(FieldValues.CONTINUOUS_DOUBLE_ZERO) + " or " + PMMLException.formatValue(FieldValues.CONTINUOUS_DOUBLE_ONE) + ", got " + PMMLException.formatValue(value));
}
}
return result;
}
static
public Value evaluateDistance(ValueFactory valueFactory, ComparisonMeasure comparisonMeasure, List extends ComparisonField>> comparisonFields, List values, List referenceValues, Value adjustment){
Distance measure = TypeUtil.cast(Distance.class, comparisonMeasure.getMeasure());
double innerPower;
double outerPower;
if(measure instanceof Euclidean){
innerPower = outerPower = 2d;
} else
if(measure instanceof SquaredEuclidean){
innerPower = 2d;
outerPower = 1d;
} else
if(measure instanceof Chebychev || measure instanceof CityBlock){
innerPower = outerPower = 1d;
} else
if(measure instanceof Minkowski){
Minkowski minkowski = (Minkowski)measure;
double p = minkowski.getPParameter();
if(p < 0d){
throw new InvalidAttributeException(minkowski, PMMLAttributes.MINKOWSKI_PPARAMETER, p);
}
innerPower = outerPower = p;
} else
{
throw new UnsupportedElementException(measure);
}
Vector distances = valueFactory.newVector(0);
for(int i = 0, max = comparisonFields.size(); i < max; i++){
ComparisonField comparisonField = comparisonFields.get(i);
FieldValue value = values.get(i);
if(Objects.equals(FieldValues.MISSING_VALUE, value)){
continue;
}
FieldValue referenceValue = referenceValues.get(i);
Value distance = evaluateInnerFunction(valueFactory, comparisonMeasure, comparisonField, value, referenceValue, innerPower);
distances.add(distance.doubleValue());
}
if(measure instanceof Euclidean || measure instanceof SquaredEuclidean || measure instanceof CityBlock || measure instanceof Minkowski){
Value result = distances.sum();
if(!adjustment.equals(1d)){
result.multiply(adjustment);
} // End if
if(outerPower != 1d){
result.inversePower(outerPower);
}
return result;
} else
if(measure instanceof Chebychev){
Value result = distances.max();
if(!adjustment.equals(1d)){
result.multiply(adjustment);
}
return result;
} else
{
throw new UnsupportedElementException(measure);
}
}
static
private Value evaluateInnerFunction(ValueFactory valueFactory, ComparisonMeasure comparisonMeasure, ComparisonField> comparisonField, FieldValue value, FieldValue referenceValue, double power){
CompareFunction compareFunction = comparisonField.getCompareFunction();
if(compareFunction == null){
compareFunction = comparisonMeasure.getCompareFunction();
// The ComparisonMeasure element is limited to "attribute-less" comparison functions
switch(compareFunction){
case ABS_DIFF:
case DELTA:
case EQUAL:
break;
case GAUSS_SIM:
case TABLE:
throw new InvalidAttributeException(comparisonMeasure, compareFunction);
default:
throw new UnsupportedAttributeException(comparisonMeasure, compareFunction);
}
}
Value distance;
switch(compareFunction){
case ABS_DIFF:
{
distance = valueFactory.newValue((value.asNumber()).doubleValue()).subtract((referenceValue.asNumber()).doubleValue());
distance.abs();
}
break;
case GAUSS_SIM:
{
Double similarityScale = comparisonField.getSimilarityScale();
if(similarityScale == null){
throw new InvalidElementException(comparisonField);
}
distance = valueFactory.newValue((value.asNumber()).doubleValue()).subtract((referenceValue.asNumber()).doubleValue());
distance.gaussSim(similarityScale);
}
break;
case DELTA:
{
boolean equals = (value).equalsValue(referenceValue);
distance = valueFactory.newValue(equals ? 0d : 1d);
}
break;
case EQUAL:
{
boolean equals = (value).equalsValue(referenceValue);
distance = valueFactory.newValue(equals ? 1d : 0d);
}
break;
case TABLE:
throw new UnsupportedAttributeException(comparisonField, compareFunction);
default:
throw new UnsupportedAttributeException(comparisonField, compareFunction);
}
if(power != 1d){
distance.power(power);
}
Double fieldWeight = comparisonField.getFieldWeight();
if(fieldWeight != null && fieldWeight != 1d){
distance.multiply(fieldWeight);
}
return distance;
}
static
public Value calculateAdjustment(ValueFactory valueFactory, List values){
return calculateAdjustment(valueFactory, values, null);
}
static
public Value calculateAdjustment(ValueFactory valueFactory, List values, List extends Number> adjustmentValues){
Value sum = valueFactory.newValue();
Value nonmissingSum = valueFactory.newValue();
for(int i = 0; i < values.size(); i++){
FieldValue value = values.get(i);
double adjustmentValue = (adjustmentValues != null ? (adjustmentValues.get(i)).doubleValue() : 1d);
if(adjustmentValue != 0d){
sum.add(adjustmentValue);
if(value != null){
nonmissingSum.add(adjustmentValue);
}
}
}
if(nonmissingSum.equals(0d)){
throw new UndefinedResultException();
}
return sum.divide(nonmissingSum);
}
}
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