org.molgenis.omx.xgap.ProbeSetMetaData Maven / Gradle / Ivy
/* File: /tmp/molgenis/target/checkout/molgenis-omx-das/target/generated-sources/molgenis/java/org/molgenis/omx/xgap/ProbeSetMetaData.java
* Generator: org.molgenis.generators.EntityMetaDataGen 4.0.0-testing
*
* THIS FILE HAS BEEN GENERATED, PLEASE DO NOT EDIT!
*/
package org.molgenis.omx.xgap;
import static org.molgenis.MolgenisFieldTypes.FieldTypeEnum.*;
import org.molgenis.data.support.DefaultEntityMetaData;
import org.molgenis.data.support.DefaultAttributeMetaData;
public class ProbeSetMetaData extends DefaultEntityMetaData
{
public ProbeSetMetaData()
{
super("ProbeSet", ProbeSet.class);
setLabel("ProbeSet");
setDescription(" A set of Probes. E.g. an Affymetrix probeset has multiple\n\t\t\t\tprobes. It implements locus because sometimes you want to give the complete set of probes a range,\n\t\t\t\tfor example: indicating that this set of probes spans basepair 0 through 10.000.000 on chromosome 3.\n\t\t\t\tThe same information could arguably also be queried from the probes themselves, but if you have 40k probes,\n\t\t\t\tretrieving the same information from only ProbeSet (if annotated so) would be much faster.");
DefaultAttributeMetaData id = new DefaultAttributeMetaData("id", INT);
id.setLabel("id");
id.setDescription("automatically generated internal id, only for internal use.");
id.setIdAttribute(true);
id.setNillable(false);
id.setReadOnly(true);
id.setUnique(false);
id.setAuto(true);
id.setVisible(false);
id.setAggregateable(false);
addAttributeMetaData(id);
DefaultAttributeMetaData identifier = new DefaultAttributeMetaData("Identifier", STRING);
identifier.setLabel("Identifier");
identifier.setDescription("user supplied or automatically assigned (using a decorator) unique and short identifier, e.g. MA1234");
identifier.setIdAttribute(false);
identifier.setNillable(false);
identifier.setReadOnly(false);
identifier.setUnique(true);
identifier.setAuto(false);
identifier.setLabelAttribute(true);
identifier.setLookupAttribute(true);
identifier.setAggregateable(false);
addAttributeMetaData(identifier);
DefaultAttributeMetaData name = new DefaultAttributeMetaData("Name", STRING);
name.setLabel("Name");
name.setDescription("human readible name, not necessary unique.");
name.setIdAttribute(false);
name.setNillable(false);
name.setReadOnly(false);
name.setUnique(false);
name.setAuto(false);
name.setLookupAttribute(true);
name.setAggregateable(false);
addAttributeMetaData(name);
DefaultAttributeMetaData __Type = new DefaultAttributeMetaData("__Type", ENUM);
__Type.setLabel("__Type");
__Type.setDescription("Subtypes have to be set to allow searching");
__Type.setIdAttribute(false);
__Type.setNillable(false);
__Type.setReadOnly(true);
__Type.setUnique(false);
__Type.setAuto(true);
__Type.setVisible(false);
__Type.setAggregateable(false);
addAttributeMetaData(__Type);
DefaultAttributeMetaData description = new DefaultAttributeMetaData("description", TEXT);
description.setLabel("description");
description.setDescription("(Optional) Rudimentary meta data about the observable feature. Use of ontology terms references to establish unambigious descriptions is recommended");
description.setIdAttribute(false);
description.setNillable(true);
description.setReadOnly(false);
description.setUnique(false);
description.setAuto(false);
description.setLookupAttribute(true);
description.setAggregateable(false);
addAttributeMetaData(description);
DefaultAttributeMetaData chromosome = new DefaultAttributeMetaData("Chromosome", XREF);
chromosome.setLabel("Chromosome");
chromosome.setDescription("Reference to the chromosome this position belongs to.");
chromosome.setIdAttribute(false);
chromosome.setNillable(true);
chromosome.setReadOnly(false);
chromosome.setUnique(false);
chromosome.setAuto(false);
chromosome.setRefEntity(new org.molgenis.omx.xgap.ChromosomeMetaData());
chromosome.setAggregateable(false);
addAttributeMetaData(chromosome);
DefaultAttributeMetaData cM = new DefaultAttributeMetaData("cM", DECIMAL);
cM.setLabel("cMPosition");
cM.setDescription("genetic map position in centi morgan (cM).");
cM.setIdAttribute(false);
cM.setNillable(true);
cM.setReadOnly(false);
cM.setUnique(false);
cM.setAuto(false);
cM.setAggregateable(false);
addAttributeMetaData(cM);
DefaultAttributeMetaData bpStart = new DefaultAttributeMetaData("bpStart", LONG);
bpStart.setLabel("Start (5')");
bpStart.setDescription("numeric basepair postion (5') on the chromosome");
bpStart.setIdAttribute(false);
bpStart.setNillable(true);
bpStart.setReadOnly(false);
bpStart.setUnique(false);
bpStart.setAuto(false);
bpStart.setAggregateable(false);
addAttributeMetaData(bpStart);
DefaultAttributeMetaData bpEnd = new DefaultAttributeMetaData("bpEnd", LONG);
bpEnd.setLabel("End");
bpEnd.setDescription("numeric basepair postion (3') on the chromosome");
bpEnd.setIdAttribute(false);
bpEnd.setNillable(true);
bpEnd.setReadOnly(false);
bpEnd.setUnique(false);
bpEnd.setAuto(false);
bpEnd.setAggregateable(false);
addAttributeMetaData(bpEnd);
DefaultAttributeMetaData seq = new DefaultAttributeMetaData("Seq", TEXT);
seq.setLabel("Seq");
seq.setDescription("The FASTA text representation of the sequence.");
seq.setIdAttribute(false);
seq.setNillable(true);
seq.setReadOnly(false);
seq.setUnique(false);
seq.setAuto(false);
seq.setAggregateable(false);
addAttributeMetaData(seq);
DefaultAttributeMetaData symbol = new DefaultAttributeMetaData("Symbol", STRING);
symbol.setLabel("Symbol");
symbol.setDescription("todo");
symbol.setIdAttribute(false);
symbol.setNillable(true);
symbol.setReadOnly(false);
symbol.setUnique(false);
symbol.setAuto(false);
symbol.setAggregateable(false);
addAttributeMetaData(symbol);
}
}