Download svart JAR 1.0.2 with all dependencies

a library to ease representation of variants and performing genomic manipulations

Files of the artifact svart version 1.0.2 from the group org.monarchinitiative.svart.

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Artifact svart
Group org.monarchinitiative.svart
Version 1.0.2
Last update 22. November 2021
Tags: manipulations genomic representation library performing ease variants
Organization not specified
URL https://github.com/exomiser/svart
License BSD 3-clause "New" or "Revised" license
Dependencies amount 0
Dependencies No dependencies
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There is a newer version: 2.0.0-RC6

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Source code of svart version 1.0.2

META-INF

META-INF.META-INF.MANIFEST.MF

META-INF.maven.org.monarchinitiative.svart.svart

META-INF.maven.org.monarchinitiative.svart.svart.META-INF.maven.org.monarchinitiative.svart.svart.pom.properties

META-INF.maven.org.monarchinitiative.svart.svart.META-INF.maven.org.monarchinitiative.svart.svart.pom.xml

.module-info

org.monarchinitiative.svart

org.monarchinitiative.svart.org.monarchinitiative.svart.AssignedMoleculeType

org.monarchinitiative.svart.org.monarchinitiative.svart.BaseBreakendVariant

org.monarchinitiative.svart.org.monarchinitiative.svart.BaseGenomicRegion

org.monarchinitiative.svart.org.monarchinitiative.svart.BaseVariant

org.monarchinitiative.svart.org.monarchinitiative.svart.Bound

org.monarchinitiative.svart.org.monarchinitiative.svart.Breakend

org.monarchinitiative.svart.org.monarchinitiative.svart.BreakendVariant

org.monarchinitiative.svart.org.monarchinitiative.svart.ConfidenceInterval

org.monarchinitiative.svart.org.monarchinitiative.svart.Contig

org.monarchinitiative.svart.org.monarchinitiative.svart.CoordinateSystem

org.monarchinitiative.svart.org.monarchinitiative.svart.CoordinateSystemed

org.monarchinitiative.svart.org.monarchinitiative.svart.Coordinates

org.monarchinitiative.svart.org.monarchinitiative.svart.CoordinatesOutOfBoundsException

org.monarchinitiative.svart.org.monarchinitiative.svart.GenomicAssemblies

org.monarchinitiative.svart.org.monarchinitiative.svart.GenomicAssembly

org.monarchinitiative.svart.org.monarchinitiative.svart.GenomicComparators

org.monarchinitiative.svart.org.monarchinitiative.svart.GenomicRegion

org.monarchinitiative.svart.org.monarchinitiative.svart.ImprecisePosition

org.monarchinitiative.svart.org.monarchinitiative.svart.InvalidCoordinatesException

org.monarchinitiative.svart.org.monarchinitiative.svart.Position

org.monarchinitiative.svart.org.monarchinitiative.svart.PrecisePosition

org.monarchinitiative.svart.org.monarchinitiative.svart.Region

org.monarchinitiative.svart.org.monarchinitiative.svart.SequenceRole

org.monarchinitiative.svart.org.monarchinitiative.svart.Strand

org.monarchinitiative.svart.org.monarchinitiative.svart.Stranded

org.monarchinitiative.svart.org.monarchinitiative.svart.UnknownContig

org.monarchinitiative.svart.org.monarchinitiative.svart.UnresolvedBreakend

org.monarchinitiative.svart.org.monarchinitiative.svart.Variant

org.monarchinitiative.svart.org.monarchinitiative.svart.VariantType

org.monarchinitiative.svart.assemblies

org.monarchinitiative.svart.assemblies.org.monarchinitiative.svart.assemblies.GCF_000001405.25_GRCh37.p13_assembly_report.txt

org.monarchinitiative.svart.assemblies.org.monarchinitiative.svart.assemblies.GCF_000001405.39_GRCh38.p13_assembly_report.txt

org.monarchinitiative.svart.assemblies.org.monarchinitiative.svart.assemblies.GCF_000001635.26_GRCm38.p6_assembly_report.txt

org.monarchinitiative.svart.assemblies.org.monarchinitiative.svart.assemblies.GCF_000001635.27_GRCm39_assembly_report.txt

org.monarchinitiative.svart.assemblies.org.monarchinitiative.svart.assemblies.README.txt

org.monarchinitiative.svart.impl

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultBreakend

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultBreakendVariant

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultContig

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultGenomicAssembly

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultGenomicRegion

org.monarchinitiative.svart.impl.org.monarchinitiative.svart.impl.DefaultVariant

org.monarchinitiative.svart.parsers

org.monarchinitiative.svart.parsers.org.monarchinitiative.svart.parsers.GenomicAssemblyParser

org.monarchinitiative.svart.util

org.monarchinitiative.svart.util.org.monarchinitiative.svart.util.Seq

org.monarchinitiative.svart.util.org.monarchinitiative.svart.util.VariantTrimmer

org.monarchinitiative.svart.util.org.monarchinitiative.svart.util.VcfBreakendFormatter

org.monarchinitiative.svart.util.org.monarchinitiative.svart.util.VcfBreakendResolver

org.monarchinitiative.svart.util.org.monarchinitiative.svart.util.VcfConverter