org.nmdp.ngs.variant.vcf.VcfParseAdapter Maven / Gradle / Ivy
/*
ngs-variant Variants.
Copyright (c) 2014-2015 National Marrow Donor Program (NMDP)
This library is free software; you can redistribute it and/or modify it
under the terms of the GNU Lesser General Public License as published
by the Free Software Foundation; either version 3 of the License, or (at
your option) any later version.
This library is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; with out even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
License for more details.
You should have received a copy of the GNU Lesser General Public License
along with this library; if not, write to the Free Software Foundation,
Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
> http://www.gnu.org/licenses/lgpl.html
*/
package org.nmdp.ngs.variant.vcf;
import java.io.IOException;
/**
* VCF parse adapter.
*/
public class VcfParseAdapter implements VcfParseListener {
@Override
public void lineNumber(final long lineNumber) throws IOException {
// empty
}
@Override
public void meta(final String meta) throws IOException {
// empty
}
@Override
public void samples(final String... samples) throws IOException {
// empty
}
@Override
public void chrom(final String chrom) throws IOException {
// empty
}
@Override
public void pos(final long pos) throws IOException {
// empty
}
@Override
public void id(final String... id) throws IOException {
// empty
}
@Override
public void ref(final String ref) throws IOException {
// empty
}
@Override
public void alt(final String... alt) throws IOException {
// empty
}
@Override
public void qual(final double qual) throws IOException {
// empty
}
@Override
public void filter(final String... filter) throws IOException {
// empty
}
@Override
public void info(final String infoId, final String... values) throws IOException {
// empty
}
@Override
public void format(final String... format) throws IOException {
// empty
}
@Override
public void genotype(final String sampleId, final String formatId, final String... values) throws IOException {
// empty
}
@Override
public boolean complete() throws IOException {
return true;
}
}
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