report_queries.duplicate_definition.rq Maven / Gradle / Ivy
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Core library for ROBOT: Library for working with OWL ontologies, especially Open Biological and Biomedical Ontologes (OBO).
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# # Duplicate Definition
#
# **Problem:** An entity shares an exact definition or elucidation with another entity. Excludes deprecated entities.
#
# **OBO Foundry Principle:** [6 - Textual Definitions](http://obofoundry.org/principles/fp-006-textual-definitions.html)
#
# **Solution:** Update the definition to reflect the entities, or determine if the entities are the same.
PREFIX obo:
PREFIX owl:
PREFIX rdfs:
SELECT DISTINCT ?entity ?property ?value WHERE {
VALUES ?property { obo:IAO_0000115
obo:IAO_0000600 }
?entity ?property ?value .
?entity2 ?property ?value .
FILTER NOT EXISTS { ?entity owl:deprecated true }
FILTER NOT EXISTS { ?entity2 owl:deprecated true }
FILTER (?entity != ?entity2)
FILTER (!isBlank(?entity))
}
ORDER BY DESC(UCASE(str(?value)))
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