Download biodata-tools JAR 0.8.1 with all dependencies

Files of the artifact biodata-tools version 0.8.1 from the group org.opencb.biodata.

Artifact biodata-tools
Group org.opencb.biodata
Version 0.8.1

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Source code of biodata-tools version 0.8.1

META-INF

META-INF.META-INF.MANIFEST.MF

org.opencb.biodata.tools.alignment

org.opencb.biodata.tools.alignment.org.opencb.biodata.tools.alignment.AlignmentFileUtils

org.opencb.biodata.tools.alignment.filtering

org.opencb.biodata.tools.alignment.filtering.org.opencb.biodata.tools.alignment.filtering.RegionFilter

org.opencb.biodata.tools.alignment.tasks

org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentRegionCoverageCalculatorTask

org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentStats

org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentStatsCalculator

org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.RegionDepth

org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.RegionDepthCalculator

org.opencb.biodata.tools.ga4gh

org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.AvroGa4GhVariantFactory

org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.Ga4ghVariantFactory

org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.ProtoGa4GhVariantFactory

org.opencb.biodata.tools.sequence.fasta

org.opencb.biodata.tools.sequence.fasta.org.opencb.biodata.tools.sequence.fasta.FastaIndexManager

org.opencb.biodata.tools.sequence.tasks

org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceInfo

org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceKmers

org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceKmersCalculator

org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceStats

org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceStatsCalculator

org.opencb.biodata.tools.variant

org.opencb.biodata.tools.variant.org.opencb.biodata.tools.variant.VariantFileUtils

org.opencb.biodata.tools.variant.org.opencb.biodata.tools.variant.VariantVcfHtsjdkReader

org.opencb.biodata.tools.variant.algorithm

org.opencb.biodata.tools.variant.algorithm.org.opencb.biodata.tools.variant.algorithm.IdentityByState

org.opencb.biodata.tools.variant.algorithm.org.opencb.biodata.tools.variant.algorithm.IdentityByStateClustering

org.opencb.biodata.tools.variant.annotation

org.opencb.biodata.tools.variant.annotation.org.opencb.biodata.tools.variant.annotation.VariantAnnotator

org.opencb.biodata.tools.variant.annotation.org.opencb.biodata.tools.variant.annotation.VariantControlAnnotator

org.opencb.biodata.tools.variant.converter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.Converter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VCFHeaderToAvroVcfHeaderConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantContextToVariantConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantContextToVariantProtoConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantFileMetadataToVCFHeaderConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantStatsToPopulationFrequencyConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantTabix

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantToProtoVcfRecord

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantToVcfSliceConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VcfRecordToVariantConverter

org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VcfSliceToVariantListConverter

org.opencb.biodata.tools.variant.converter.ga4gh

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GACallSetFactory

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GAVariantFactory

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GAVariantSetFactory

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghCallSetConverter

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghVariantConverter

org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghVariantSetConverter

org.opencb.biodata.tools.variant.filtering

org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantBedFilter

org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantFilter

org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantRegionFilter

org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantSnpFilter

org.opencb.biodata.tools.variant.merge

org.opencb.biodata.tools.variant.merge.org.opencb.biodata.tools.variant.merge.VariantMerger

org.opencb.biodata.tools.variant.simulator

org.opencb.biodata.tools.variant.simulator.org.opencb.biodata.tools.variant.simulator.VariantSimulator

org.opencb.biodata.tools.variant.simulator.org.opencb.biodata.tools.variant.simulator.VariantSimulatorConfiguration

org.opencb.biodata.tools.variant.stats

org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedEVSStatsCalculator

org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedExacStatsCalculator

org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedStatsCalculator

org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantGlobalStatsCalculator

org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantStatsCalculator

org.opencb.biodata.tools.variant.stats.writer

org.opencb.biodata.tools.variant.stats.writer.org.opencb.biodata.tools.variant.stats.writer.VariantStatsPopulationFrequencyExporter

org.opencb.biodata.tools.variant.stats.writer.org.opencb.biodata.tools.variant.stats.writer.VariantStatsTsvExporter

org.opencb.biodata.tools.variant.tasks

org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantAnnotTask

org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantFilterTask

org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantRunner

org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantStatsTask