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    Download biodata-tools JAR 0.8.2 with all dependencies


    Files of the artifact biodata-tools version 0.8.2 from the group org.opencb.biodata.

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    Download biodata-tools (0.8.2)
    Artifact biodata-tools
    Group org.opencb.biodata
    Version 0.8.2
    Last update 20. September 2016
    Organization not specified
    URL http://maven.apache.org
    License not specified
    Dependencies amount 7
    Dependencies biodata-formats, biodata-models, commons-lib, datastore-core, jackson-databind, guava, junit,
    There are maybe transitive dependencies!
    There is a newer version: 3.4.0
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    Source code of biodata-tools version 0.8.2

    META-INF
    META-INF.META-INF.MANIFEST.MF
    org.opencb.biodata.tools.alignment
    org.opencb.biodata.tools.alignment.org.opencb.biodata.tools.alignment.AlignmentFileUtils
    org.opencb.biodata.tools.alignment.filtering
    org.opencb.biodata.tools.alignment.filtering.org.opencb.biodata.tools.alignment.filtering.RegionFilter
    org.opencb.biodata.tools.alignment.tasks
    org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentRegionCoverageCalculatorTask
    org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentStats
    org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.AlignmentStatsCalculator
    org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.RegionDepth
    org.opencb.biodata.tools.alignment.tasks.org.opencb.biodata.tools.alignment.tasks.RegionDepthCalculator
    org.opencb.biodata.tools.ga4gh
    org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.AvroGa4GhVariantFactory
    org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.Ga4ghVariantFactory
    org.opencb.biodata.tools.ga4gh.org.opencb.biodata.tools.ga4gh.ProtoGa4GhVariantFactory
    org.opencb.biodata.tools.sequence.fasta
    org.opencb.biodata.tools.sequence.fasta.org.opencb.biodata.tools.sequence.fasta.FastaIndexManager
    org.opencb.biodata.tools.sequence.tasks
    org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceInfo
    org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceKmers
    org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceKmersCalculator
    org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceStats
    org.opencb.biodata.tools.sequence.tasks.org.opencb.biodata.tools.sequence.tasks.SequenceStatsCalculator
    org.opencb.biodata.tools.variant
    org.opencb.biodata.tools.variant.org.opencb.biodata.tools.variant.VariantFileUtils
    org.opencb.biodata.tools.variant.org.opencb.biodata.tools.variant.VariantVcfHtsjdkReader
    org.opencb.biodata.tools.variant.algorithm
    org.opencb.biodata.tools.variant.algorithm.org.opencb.biodata.tools.variant.algorithm.IdentityByState
    org.opencb.biodata.tools.variant.algorithm.org.opencb.biodata.tools.variant.algorithm.IdentityByStateClustering
    org.opencb.biodata.tools.variant.annotation
    org.opencb.biodata.tools.variant.annotation.org.opencb.biodata.tools.variant.annotation.VariantAnnotator
    org.opencb.biodata.tools.variant.annotation.org.opencb.biodata.tools.variant.annotation.VariantControlAnnotator
    org.opencb.biodata.tools.variant.converter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.Converter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VCFHeaderToAvroVcfHeaderConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantContextToVariantConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantContextToVariantProtoConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantFileMetadataToVCFHeaderConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantStatsToPopulationFrequencyConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantTabix
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantToProtoVcfRecord
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VariantToVcfSliceConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VcfRecordToVariantConverter
    org.opencb.biodata.tools.variant.converter.org.opencb.biodata.tools.variant.converter.VcfSliceToVariantListConverter
    org.opencb.biodata.tools.variant.converter.ga4gh
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GACallSetFactory
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GAVariantFactory
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.GAVariantSetFactory
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghCallSetConverter
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghVariantConverter
    org.opencb.biodata.tools.variant.converter.ga4gh.org.opencb.biodata.tools.variant.converter.ga4gh.Ga4ghVariantSetConverter
    org.opencb.biodata.tools.variant.filtering
    org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantBedFilter
    org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantFilter
    org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantRegionFilter
    org.opencb.biodata.tools.variant.filtering.org.opencb.biodata.tools.variant.filtering.VariantSnpFilter
    org.opencb.biodata.tools.variant.merge
    org.opencb.biodata.tools.variant.merge.org.opencb.biodata.tools.variant.merge.VariantMerger
    org.opencb.biodata.tools.variant.simulator
    org.opencb.biodata.tools.variant.simulator.org.opencb.biodata.tools.variant.simulator.VariantSimulator
    org.opencb.biodata.tools.variant.simulator.org.opencb.biodata.tools.variant.simulator.VariantSimulatorConfiguration
    org.opencb.biodata.tools.variant.stats
    org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedEVSStatsCalculator
    org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedExacStatsCalculator
    org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantAggregatedStatsCalculator
    org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantGlobalStatsCalculator
    org.opencb.biodata.tools.variant.stats.org.opencb.biodata.tools.variant.stats.VariantStatsCalculator
    org.opencb.biodata.tools.variant.stats.writer
    org.opencb.biodata.tools.variant.stats.writer.org.opencb.biodata.tools.variant.stats.writer.VariantStatsPopulationFrequencyExporter
    org.opencb.biodata.tools.variant.stats.writer.org.opencb.biodata.tools.variant.stats.writer.VariantStatsTsvExporter
    org.opencb.biodata.tools.variant.tasks
    org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantAnnotTask
    org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantFilterTask
    org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantRunner
    org.opencb.biodata.tools.variant.tasks.org.opencb.biodata.tools.variant.tasks.VariantStatsTask




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