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    Download cellbase-lib JAR 5.2.8 with all dependencies


    Files of the artifact cellbase-lib version 5.2.8 from the group org.opencb.cellbase.

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    Artifact cellbase-lib
    Group org.opencb.cellbase
    Version 5.2.8
    Last update 11. January 2023
    Tags: databases into database projects cellbase query several biological many integrates plus nosql
    Organization not specified
    URL Not specified
    License not specified
    Dependencies amount 6
    Dependencies cellbase-core, commons-datastore-mongodb, jetty-util-ajax, jersey-client, poi-ooxml, log4j-core,
    There are maybe transitive dependencies!
    There is a newer version: 6.3.0
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    Source code of cellbase-lib version 5.2.8

    META-INF
    META-INF.META-INF.MANIFEST.MF
    META-INF.maven.org.opencb.cellbase.cellbase-lib
    META-INF.maven.org.opencb.cellbase.cellbase-lib.META-INF.maven.org.opencb.cellbase.cellbase-lib.pom.properties
    META-INF.maven.org.opencb.cellbase.cellbase-lib.META-INF.maven.org.opencb.cellbase.cellbase-lib.pom.xml
    .mongodb-indexes.json
    org.opencb.cellbase.lib
    org.opencb.cellbase.lib.org.opencb.cellbase.lib.EtlCommons
    org.opencb.cellbase.lib.org.opencb.cellbase.lib.MongoDBCollectionConfiguration
    org.opencb.cellbase.lib.builders
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CaddAllAnnotationBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CaddScoreBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CellBaseBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.ConservationBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.DrugParser
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.EnsemblGeneBuilderIndexer
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilderIndexer
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilderUtils
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneExpressionAtlasBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GenomeSequenceFastaBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.InteractionBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.OntologyBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.ProteinBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.PubMedBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RefSeqGeneBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RefSeqGeneBuilderIndexer
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RegulatoryFeatureBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RegulatoryRegionBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RepeatsBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RevelScoreBuilder
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RocksDbManager
    org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.SpliceBuilder
    org.opencb.cellbase.lib.builders.clinical.variant
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinVarIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinVarParser
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinicalIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinicalVariantBuilder
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.CosmicBuilder
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.CosmicIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.DOCMIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.GwasIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.HGMDIndexer
    org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.IARCTP53Indexer
    org.opencb.cellbase.lib.builders.formats
    org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.Cadd
    org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.ConservedRegionFeature
    org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.GeneExpressionAtlas
    org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.Genome
    org.opencb.cellbase.lib.builders.utils
    org.opencb.cellbase.lib.builders.utils.org.opencb.cellbase.lib.builders.utils.GenomeSequenceUtils
    org.opencb.cellbase.lib.db
    org.opencb.cellbase.lib.db.org.opencb.cellbase.lib.db.MongoDBManager
    org.opencb.cellbase.lib.download
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.AbstractDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.CaddDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.ClinicalDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.CoreDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.DownloadFile
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.DownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.Downloader
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.GeneDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.GenomeDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.MissenseScoresDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.OntologyDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.ProteinDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.PubMedDownloadManager
    org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.RegulationDownloadManager
    org.opencb.cellbase.lib.impl.core
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.CellBaseCoreDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.CellBaseDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ClinicalMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.GeneMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.GenomeMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MetaMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MissenseVariationFunctionalScoreMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MongoDBAdaptorFactory
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.OntologyMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ProteinMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.PublicationMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.RegulationMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ReleaseMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.RepeatsMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.SpliceScoreMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.TranscriptMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.VariantMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.XRefMongoDBAdaptor
    org.opencb.cellbase.lib.impl.core.converters
    org.opencb.cellbase.lib.impl.core.converters.org.opencb.cellbase.lib.impl.core.converters.VariantConverter
    org.opencb.cellbase.lib.indexer
    org.opencb.cellbase.lib.indexer.org.opencb.cellbase.lib.indexer.IndexManager
    org.opencb.cellbase.lib.install
    org.opencb.cellbase.lib.install.org.opencb.cellbase.lib.install.InstallManager
    org.opencb.cellbase.lib.install.org.opencb.cellbase.lib.install.MongoDBShardUtils
    org.opencb.cellbase.lib.iterator
    org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.CellBaseIterator
    org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.CellBaseMongoDBIterator
    org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.VariantMongoDBIterator
    org.opencb.cellbase.lib.loader
    org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.CellBaseLoader
    org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.CellBaseTypeConverter
    org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.LoadRunner
    org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.LoaderException
    org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.MongoDBCellBaseLoader
    org.opencb.cellbase.lib.managers
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.AbstractManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.AggregationApi
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.CellBaseManagerFactory
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.ClinicalManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.DataReleaseManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.FeatureApi
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.FileManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.GeneManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.GenomeManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.MetaManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.OntologyManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.ProteinManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.PublicationManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.RegulatoryManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.RepeatsManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.TfbsManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.TranscriptManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.VariantManager
    org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.XrefManager
    org.opencb.cellbase.lib.monitor
    org.opencb.cellbase.lib.monitor.org.opencb.cellbase.lib.monitor.Monitor
    org.opencb.cellbase.lib.variant
    org.opencb.cellbase.lib.variant.org.opencb.cellbase.lib.variant.VariantAnnotationUtils
    org.opencb.cellbase.lib.variant.annotation
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.CellBaseNormalizerSequenceAdaptor
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeBNDCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeCNVGainCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeDeletionCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeGenericRegionCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeInsertionCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeMNVCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeSNVCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.UnsupportedURLVariantFormat
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.VariantAnnotationCalculator
    org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.VariantAnnotator
    org.opencb.cellbase.lib.variant.hgvs
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.BuildingComponents
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.CdnaCoord
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsCalculator
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsProtein
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsProteinCalculator
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsTranscriptCalculator
    org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.TranscriptUtils




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