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Files of the artifact bioformats version 2.0.0 from the group org.opencb.commons.

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Artifact bioformats
Group org.opencb.commons
Version 2.0.0
Organization not specified
URL Not specified
License not specified
Dependencies amount 11
Dependencies commons-lib, guava, slf4j-api, javax.ws.rs-api, jersey-client, jersey-core, jersey-multipart, junit, protobuf-java, jersey-client, jersey-media-multipart,
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Source code of bioformats version 2.0.0

META-INF

META-INF.META-INF.MANIFEST.MF

org.opencb.commons.bioformats.alignment

org.opencb.commons.bioformats.alignment.org.opencb.commons.bioformats.alignment.Alignment

org.opencb.commons.bioformats.alignment.org.opencb.commons.bioformats.alignment.AlignmentHelper

org.opencb.commons.bioformats.alignment.org.opencb.commons.bioformats.alignment.AlignmentRegion

org.opencb.commons.bioformats.alignment.org.opencb.commons.bioformats.alignment.ShortReferenceSequenceException

org.opencb.commons.bioformats.alignment.io.readers

org.opencb.commons.bioformats.alignment.io.readers.org.opencb.commons.bioformats.alignment.io.readers.AlignmentDataReader

org.opencb.commons.bioformats.alignment.io.readers.org.opencb.commons.bioformats.alignment.io.readers.AlignmentRegionDataReader

org.opencb.commons.bioformats.alignment.io.writers

org.opencb.commons.bioformats.alignment.io.writers.org.opencb.commons.bioformats.alignment.io.writers.AlignmentDataWriter

org.opencb.commons.bioformats.alignment.io.writers.org.opencb.commons.bioformats.alignment.io.writers.AlignmentRegionDataWriter

org.opencb.commons.bioformats.alignment.io.writers.org.opencb.commons.bioformats.alignment.io.writers.AlignmentTabixDataWriter

org.opencb.commons.bioformats.alignment.io.writers.coverage

org.opencb.commons.bioformats.alignment.io.writers.coverage.org.opencb.commons.bioformats.alignment.io.writers.coverage.AlignmentCoverageDataWriter

org.opencb.commons.bioformats.alignment.sam.io

org.opencb.commons.bioformats.alignment.sam.io.org.opencb.commons.bioformats.alignment.sam.io.AlignmentBamDataReader

org.opencb.commons.bioformats.alignment.sam.io.org.opencb.commons.bioformats.alignment.sam.io.AlignmentBamDataWriter

org.opencb.commons.bioformats.alignment.sam.io.org.opencb.commons.bioformats.alignment.sam.io.AlignmentSamDataReader

org.opencb.commons.bioformats.alignment.sam.io.org.opencb.commons.bioformats.alignment.sam.io.AlignmentSamDataWriter

org.opencb.commons.bioformats.alignment.stats

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.AlignmentCoverage

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.AlignmentCoverageCalculator

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.AlignmentRegionSummary

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.MeanCoverage

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.RegionCoverage

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.SamCalculateStats

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.SamGlobalStats

org.opencb.commons.bioformats.alignment.stats.org.opencb.commons.bioformats.alignment.stats.SamRecordStats

org.opencb.commons.bioformats.alignment.tasks

org.opencb.commons.bioformats.alignment.tasks.org.opencb.commons.bioformats.alignment.tasks.AlignmentCoverageCalculatorTask

org.opencb.commons.bioformats.alignment.tasks.org.opencb.commons.bioformats.alignment.tasks.AlignmentRegionCompactorTask

org.opencb.commons.bioformats.alignment.tasks.org.opencb.commons.bioformats.alignment.tasks.AlignmentRegionSummarizeTask

org.opencb.commons.bioformats.commons.exception

org.opencb.commons.bioformats.commons.exception.org.opencb.commons.bioformats.commons.exception.FileFormatException

org.opencb.commons.bioformats.commons.graph.dot

org.opencb.commons.bioformats.commons.graph.dot.org.opencb.commons.bioformats.commons.graph.dot.Dot

org.opencb.commons.bioformats.commons.graph.dot.org.opencb.commons.bioformats.commons.graph.dot.Edge

org.opencb.commons.bioformats.commons.graph.dot.org.opencb.commons.bioformats.commons.graph.dot.Node

org.opencb.commons.bioformats.commons.io

org.opencb.commons.bioformats.commons.io.org.opencb.commons.bioformats.commons.io.AbstractFormatReader

org.opencb.commons.bioformats.commons.io.org.opencb.commons.bioformats.commons.io.AbstractFormatWriter

org.opencb.commons.bioformats.commons.io.org.opencb.commons.bioformats.commons.io.BeanReader

org.opencb.commons.bioformats.feature

org.opencb.commons.bioformats.feature.org.opencb.commons.bioformats.feature.AllelesCode

org.opencb.commons.bioformats.feature.org.opencb.commons.bioformats.feature.Genotype

org.opencb.commons.bioformats.feature.org.opencb.commons.bioformats.feature.Genotypes

org.opencb.commons.bioformats.feature.org.opencb.commons.bioformats.feature.Region

org.opencb.commons.bioformats.feature.bed

org.opencb.commons.bioformats.feature.bed.org.opencb.commons.bioformats.feature.bed.Bed

org.opencb.commons.bioformats.feature.bed.io

org.opencb.commons.bioformats.feature.bed.io.org.opencb.commons.bioformats.feature.bed.io.BedReader

org.opencb.commons.bioformats.feature.gff

org.opencb.commons.bioformats.feature.gff.org.opencb.commons.bioformats.feature.gff.Gff

org.opencb.commons.bioformats.feature.gff.org.opencb.commons.bioformats.feature.gff.Gff2

org.opencb.commons.bioformats.feature.gff.io

org.opencb.commons.bioformats.feature.gff.io.org.opencb.commons.bioformats.feature.gff.io.Gff2Reader

org.opencb.commons.bioformats.feature.gff.io.org.opencb.commons.bioformats.feature.gff.io.GffReader

org.opencb.commons.bioformats.feature.gtf

org.opencb.commons.bioformats.feature.gtf.org.opencb.commons.bioformats.feature.gtf.Gtf

org.opencb.commons.bioformats.feature.gtf.io

org.opencb.commons.bioformats.feature.gtf.io.org.opencb.commons.bioformats.feature.gtf.io.GtfReader

org.opencb.commons.bioformats.network.biopax

org.opencb.commons.bioformats.network.biopax.org.opencb.commons.bioformats.network.biopax.BioPax

org.opencb.commons.bioformats.network.biopax.org.opencb.commons.bioformats.network.biopax.BioPaxConstants

org.opencb.commons.bioformats.network.biopax.org.opencb.commons.bioformats.network.biopax.BioPaxElement

org.opencb.commons.bioformats.network.biopax.org.opencb.commons.bioformats.network.biopax.BioPaxParser

org.opencb.commons.bioformats.network.biopax.org.opencb.commons.bioformats.network.biopax.ProteinInteraction

org.opencb.commons.bioformats.network.biopax.core

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Control

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Conversion

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Entity

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Gene

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.GeneticInteraction

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Interaction

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.MolecularInteraction

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.Pathway

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.PhysicalEntity

org.opencb.commons.bioformats.network.biopax.core.org.opencb.commons.bioformats.network.biopax.core.TemplateReaction

org.opencb.commons.bioformats.network.psi

org.opencb.commons.bioformats.network.psi.org.opencb.commons.bioformats.network.psi.PsiParser

org.opencb.commons.bioformats.network.psi.v253jaxb

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.AttributeListType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.AvailabilityType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.BaseLocationType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.BibrefType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.BioSourceType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ConfidenceListType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ConfidenceType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.CvType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.DbReferenceType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.EntrySet

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ExperimentRefListType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ExperimentType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.FeatureElementType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.FullNameType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.InteractionElementType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.InteractorElementType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.IntervalType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.LabelType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.NamesType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ObjectFactory

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.OpenCvType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ParameterType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.ParticipantType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.PositionType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.XrefType

org.opencb.commons.bioformats.network.psi.v253jaxb.org.opencb.commons.bioformats.network.psi.v253jaxb.package-info

org.opencb.commons.bioformats.network.psi.v254jaxb

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Alias

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Attribute

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.AttributeList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Availability

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.AvailabilityList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.BaseLocation

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Bibref

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.BioSource

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Confidence

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ConfidenceBase

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ConfidenceList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.CvType

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.DbReference

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Entry

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.EntrySet

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentDescription

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentDescriptionList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentRefList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalInteractor

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalInteractorList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalPreparation

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalPreparationList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalRole

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ExperimentalRoleList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Feature

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.FeatureList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.FullName

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.HostOrganism

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.HostOrganismList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.InferredInteraction

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.InferredInteractionList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.InferredInteractionParticipant

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Interaction

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.InteractionList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Interactor

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.InteractorList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Interval

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Label

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Names

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ObjectFactory

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.OpenCvType

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Parameter

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ParameterBase

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ParameterList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Participant

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ParticipantIdentificationMethod

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ParticipantIdentificationMethodList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.ParticipantList

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Position

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Source

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.Xref

org.opencb.commons.bioformats.network.psi.v254jaxb.org.opencb.commons.bioformats.network.psi.v254jaxb.package-info

org.opencb.commons.bioformats.pedigree

org.opencb.commons.bioformats.pedigree.org.opencb.commons.bioformats.pedigree.Condition

org.opencb.commons.bioformats.pedigree.org.opencb.commons.bioformats.pedigree.Family

org.opencb.commons.bioformats.pedigree.org.opencb.commons.bioformats.pedigree.Individual

org.opencb.commons.bioformats.pedigree.org.opencb.commons.bioformats.pedigree.Pedigree

org.opencb.commons.bioformats.pedigree.org.opencb.commons.bioformats.pedigree.Sex

org.opencb.commons.bioformats.pedigree.io.readers

org.opencb.commons.bioformats.pedigree.io.readers.org.opencb.commons.bioformats.pedigree.io.readers.PedigreePedReader

org.opencb.commons.bioformats.pedigree.io.readers.org.opencb.commons.bioformats.pedigree.io.readers.PedigreeReader

org.opencb.commons.bioformats.pedigree.io.writers

org.opencb.commons.bioformats.pedigree.io.writers.org.opencb.commons.bioformats.pedigree.io.writers.PedigreePedSqliteWriter

org.opencb.commons.bioformats.pedigree.io.writers.org.opencb.commons.bioformats.pedigree.io.writers.PedigreeWriter

org.opencb.commons.bioformats.protein.uniprot

org.opencb.commons.bioformats.protein.uniprot.org.opencb.commons.bioformats.protein.uniprot.UniprotParser

org.opencb.commons.bioformats.protein.uniprot.v135jaxb

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.CitationType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.CommentType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.ConsortiumType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.DbReferenceType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.Entry

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.EventType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.EvidenceType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.EvidencedStringType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.FeatureType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.GeneLocationType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.GeneNameType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.InteractantType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.IsoformType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.KeywordType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.LocationType

org.opencb.commons.bioformats.protein.uniprot.v135jaxb.org.opencb.commons.bioformats.protein.uniprot.v135jaxb.NameListType

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