org.opencds.cqf.tooling.cli.OperationFactory Maven / Gradle / Ivy
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package org.opencds.cqf.tooling.cli;
import java.lang.reflect.Field;
import java.lang.reflect.InvocationTargetException;
import java.util.HashMap;
import java.util.Map;
import org.apache.commons.lang3.NotImplementedException;
import org.opencds.cqf.tooling.Operation;
import org.opencds.cqf.tooling.acceleratorkit.DTProcessor;
import org.opencds.cqf.tooling.acceleratorkit.Processor;
import org.opencds.cqf.tooling.casereporting.transformer.ErsdTransformer;
import org.opencds.cqf.tooling.dateroller.DataDateRollerOperation;
import org.opencds.cqf.tooling.exception.InvalidOperationArgs;
import org.opencds.cqf.tooling.exception.OperationNotFound;
import org.opencds.cqf.tooling.library.r4.LibraryGenerator;
import org.opencds.cqf.tooling.measure.r4.RefreshR4MeasureOperation;
import org.opencds.cqf.tooling.measure.stu3.RefreshStu3MeasureOperation;
import org.opencds.cqf.tooling.modelinfo.StructureDefinitionToModelInfo;
import org.opencds.cqf.tooling.operation.BundleResources;
import org.opencds.cqf.tooling.operation.BundleToResources;
import org.opencds.cqf.tooling.operation.BundleToTransactionOperation;
import org.opencds.cqf.tooling.operation.ExecuteMeasureTestOperation;
import org.opencds.cqf.tooling.operation.ExtractMatBundleOperation;
import org.opencds.cqf.tooling.operation.GenerateCQLFromDroolOperation;
import org.opencds.cqf.tooling.operation.IgBundler;
import org.opencds.cqf.tooling.operation.PostBundlesInDirOperation;
import org.opencds.cqf.tooling.operation.PostmanCollectionOperation;
import org.opencds.cqf.tooling.operation.ProfilesToSpreadsheet;
import org.opencds.cqf.tooling.operation.QICoreElementsToSpreadsheet;
import org.opencds.cqf.tooling.operation.RefreshIGOperation;
import org.opencds.cqf.tooling.operation.RefreshLibraryOperation;
import org.opencds.cqf.tooling.operation.ScaffoldOperation;
import org.opencds.cqf.tooling.operation.StripGeneratedContentOperation;
import org.opencds.cqf.tooling.operation.TestIGOperation;
import org.opencds.cqf.tooling.operation.VmrToFhirOperation;
import org.opencds.cqf.tooling.operations.ExecutableOperation;
import org.opencds.cqf.tooling.operations.OperationParam;
import org.opencds.cqf.tooling.qdm.QdmToQiCore;
import org.opencds.cqf.tooling.quick.QuickPageGenerator;
import org.opencds.cqf.tooling.terminology.CMSFlatMultiValueSetGenerator;
import org.opencds.cqf.tooling.terminology.EnsureExecutableValueSetOperation;
import org.opencds.cqf.tooling.terminology.GenericValueSetGenerator;
import org.opencds.cqf.tooling.terminology.HEDISValueSetGenerator;
import org.opencds.cqf.tooling.terminology.RCKMSJurisdictionsGenerator;
import org.opencds.cqf.tooling.terminology.SpreadsheetToCQLOperation;
import org.opencds.cqf.tooling.terminology.ToJsonValueSetDbOperation;
import org.opencds.cqf.tooling.terminology.VSACBatchValueSetGenerator;
import org.opencds.cqf.tooling.terminology.VSACValueSetGenerator;
import org.opencds.cqf.tooling.terminology.distributable.DistributableValueSetGenerator;
import org.opencds.cqf.tooling.terminology.templateToValueSetGenerator.TemplateToValueSetGenerator;
import org.opencds.cqf.tooling.utilities.OperationUtils;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
class OperationFactory {
private static final Logger logger = LoggerFactory.getLogger(OperationFactory.class);
private static String operationName;
private static Map paramMap;
private static boolean showHelpMenu = false;
private OperationFactory() {
}
private static void processArgs(String[] args) {
paramMap = new HashMap<>();
for (int i = 1; i < args.length; ++i) {
if (OperationUtils.isHelpArg(args[i])) {
showHelpMenu = true;
return;
}
String[] argAndValue = args[i].split("=", 2);
if (argAndValue.length == 2) {
paramMap.put(argAndValue[0].replace("-", ""), argAndValue[1]);
}
else {
throw new InvalidOperationArgs(String.format(
"Invalid argument: %s found for operation: %s", args[i], operationName));
}
}
}
private static ExecutableOperation initialize(ExecutableOperation operation)
throws NoSuchMethodException, InvocationTargetException, IllegalAccessException {
for (Field field : operation.getClass().getDeclaredFields()) {
if (field.isAnnotationPresent(OperationParam.class)) {
boolean isInitialized = false;
for (String alias : field.getAnnotation(OperationParam.class).alias()) {
if (paramMap.containsKey(alias)) {
Class paramType = OperationUtils.getParamType(operation,
field.getAnnotation(OperationParam.class).setter());
operation.getClass().getDeclaredMethod(
field.getAnnotation(OperationParam.class).setter(), paramType
).invoke(operation, OperationUtils.mapParamType(paramMap.get(alias), paramType));
isInitialized = true;
}
}
if (!isInitialized) {
if (field.getAnnotation(OperationParam.class).required()) {
throw new InvalidOperationArgs("Missing required argument: " + field.getName());
}
else if (!field.getAnnotation(OperationParam.class).defaultValue().isEmpty()) {
Class paramType = OperationUtils.getParamType(operation,
field.getAnnotation(OperationParam.class).setter());
operation.getClass().getDeclaredMethod(
field.getAnnotation(OperationParam.class).setter(), paramType
).invoke(operation, OperationUtils.mapParamType(
field.getAnnotation(OperationParam.class).defaultValue(), paramType));
}
}
}
}
return operation;
}
static ExecutableOperation createOperation(String operationName, Class operationClass, String[] args)
throws NoSuchMethodException, InvocationTargetException, InstantiationException, IllegalAccessException {
if (operationClass == null) {
throw new OperationNotFound("Unable to resolve operation: " + operationName);
}
OperationFactory.operationName = operationName;
processArgs(args);
if (showHelpMenu) {
logger.info(OperationUtils.getHelpMenu(
(ExecutableOperation) operationClass.getDeclaredConstructor().newInstance()));
showHelpMenu = false;
return null;
}
return initialize((ExecutableOperation) operationClass.getDeclaredConstructor().newInstance());
}
static Operation createOperation(String operationName) {
switch (operationName) {
case "QdmToQiCore":
return new QdmToQiCore();
case "QiCoreQUICK":
return new QuickPageGenerator();
case "VsacXlsxToValueSet":
return new VSACValueSetGenerator();
case "DistributableXlsxToValueSet":
return new DistributableValueSetGenerator();
case "VsacMultiXlsxToValueSet":
return new CMSFlatMultiValueSetGenerator();
case "VsacXlsxToValueSetBatch":
return new VSACBatchValueSetGenerator();
case "HedisXlsxToValueSet":
return new HEDISValueSetGenerator();
case "XlsxToValueSet":
return new GenericValueSetGenerator();
case "TemplateToValueSetGenerator":
return new TemplateToValueSetGenerator();
case "EnsureExecutableValueSet":
case "EnsureComputableValueSet":
return new EnsureExecutableValueSetOperation();
case "ToJsonValueSetDb":
return new ToJsonValueSetDbOperation();
case "CqlToSTU3Library":
return new org.opencds.cqf.tooling.library.stu3.LibraryGenerator();
case "CqlToR4Library":
return new LibraryGenerator();
case "UpdateSTU3Cql":
return new org.opencds.cqf.tooling.library.stu3.LibraryGenerator();
case "UpdateR4Cql":
return new LibraryGenerator();
case "JsonSchemaGenerator":
// return new SchemaGenerator();
case "BundleIg":
return new IgBundler();
// case "PackageIG":
// return new PackageOperation();
case "GenerateCQLFromDrool":
return new GenerateCQLFromDroolOperation();
case "VmrToFhir":
return new VmrToFhirOperation();
case "RefreshIG":
return new RefreshIGOperation();
case "RefreshLibrary":
return new RefreshLibraryOperation();
case "RefreshStu3Measure":
return new RefreshStu3MeasureOperation();
case "RefreshR4Measure":
return new RefreshR4MeasureOperation();
case "ScaffoldIG":
return new ScaffoldOperation();
case "TestIG":
return new TestIGOperation();
case "CqlToMeasure":
throw new NotImplementedException("CqlToMeasure");
case "BundlesToBundle":
throw new NotImplementedException("BundlesToBundle");
case "BundleToResources":
return new BundleToResources();
case "MakeTransaction":
return new BundleToTransactionOperation();
case "ExtractMatBundle":
return new ExtractMatBundleOperation();
case "GenerateMIs":
return new StructureDefinitionToModelInfo();
case "ProcessAcceleratorKit":
return new Processor();
case "ProcessDecisionTables":
return new DTProcessor();
case "BundleResources":
return new BundleResources();
case "PostBundlesInDir":
return new PostBundlesInDirOperation();
case "JurisdictionsXlsxToCodeSystem":
return new RCKMSJurisdictionsGenerator();
case "ExecuteMeasureTest":
return new ExecuteMeasureTestOperation();
case "SpreadsheetToCQL":
return new SpreadsheetToCQLOperation();
case "PostmanCollection":
return new PostmanCollectionOperation();
case "TransformErsd":
return new ErsdTransformer();
case "RollTestsDataDates":
return new DataDateRollerOperation();
case "ProfilesToSpreadsheet":
return new ProfilesToSpreadsheet();
case "QICoreElementsToSpreadsheet":
return new QICoreElementsToSpreadsheet();
case "StripGeneratedContent":
return new StripGeneratedContentOperation();
default:
throw new IllegalArgumentException("Invalid operation: " + operationName);
}
}
}