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Various clustering algorithm implementations for all primitive types including random, random forest, K-Means (Exact, Hierarchical and Approximate), ...
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/**
* Copyright (c) 2011, The University of Southampton and the individual contributors.
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package org.openimaj.knn.pq;
import org.openimaj.knn.LongNearestNeighboursExact;
import org.openimaj.knn.LongNearestNeighboursProvider;
import org.openimaj.ml.clustering.kmeans.LongKMeans;
/**
* Utility methods for easily creating a {@link ByteProductQuantiser} using
* (Exact) K-Means.
*
* @author Jonathon Hare ([email protected])
*
*/
public final class LongProductQuantiserUtilities {
private LongProductQuantiserUtilities() {
}
/**
* Learn a {@link LongProductQuantiser} by applying exact K-Means to
* sub-vectors extracted from the given data. The length of the subvectors
* is determined by dividing the vector length by the requested number of
* assigners. The number of clusters per vector subset is constant, and must
* be less than 256.
*
* @param data
* the data to train the {@link LongProductQuantiser} on.
* @param numAssigners
* the number of sub-quantisers to learn
* @param K
* the number of centroids per sub-quantiser
* @param nIter
* the maximum number of iterations for each k-means clustering
*
* @return a trained {@link LongProductQuantiser}.
*/
public static LongProductQuantiser train(long[][] data, int numAssigners, int K, int nIter) {
if (K > 256 || K <= 0)
throw new IllegalArgumentException("0 <= K < 256");
final int subDim = data[0].length / numAssigners;
final long[][] tmp = new long[data.length][subDim];
final LongNearestNeighboursExact[] assigners = new LongNearestNeighboursExact[numAssigners];
final LongKMeans kmeans = LongKMeans.createExact(K, 100);
for (int i = 0; i < numAssigners; i++) {
// copy data
for (int j = 0; j < data.length; j++) {
System.arraycopy(data[j], i * subDim, tmp[j], 0, subDim);
}
// kmeans
final LongNearestNeighboursProvider centroids = (LongNearestNeighboursProvider) kmeans.cluster(tmp);
assigners[i] = (LongNearestNeighboursExact)centroids.getNearestNeighbours();
}
return new LongProductQuantiser(assigners);
}
/**
* Learn a {@link LongProductQuantiser} by applying exact K-Means to
* sub-vectors extracted from the given data. The length of the subvectors
* is determined by dividing the vector length by the requested number of
* assigners. The number of clusters per vector subset is constant, and set
* at 256.
*
* @param data
* the data to train the {@link LongProductQuantiser} on.
* @param numAssigners
* the number of sub-quantisers to learn
* @param nIter
* the maximum number of iterations for each k-means clustering
*
* @return a trained {@link LongProductQuantiser}.
*/
public static LongProductQuantiser train(long[][] data, int numAssigners, int nIter) {
return train(data, numAssigners, 256, nIter);
}
}