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org.openprovenance.prov.xml.ProvUtilities Maven / Gradle / Ivy
Java Objects representing the PROV model and an XML serialiser/deserialiser for them. Classes were initially generated by JAXB, from the XML schema for PROV, and over time edited by hand.
package org.openprovenance.prov.xml;
import java.util.List;
import java.util.Hashtable;
import javax.xml.datatype.XMLGregorianCalendar;
import org.openprovenance.prov.model.HasOther;
import org.openprovenance.prov.model.Statement;
import org.openprovenance.prov.model.QualifiedName;
import java.lang.reflect.Method;
/** Utilities for manipulating PROV Descriptions. */
public class ProvUtilities extends org.openprovenance.prov.model.ProvUtilities {
private ProvFactory p = new ProvFactory();
public MentionOf getMentionForRemoteEntity(Bundle local,
Entity remoteEntity,
Bundle remote) {
return getMentionForLocalEntity(local.getStatement(),
remoteEntity, remote);
}
MentionOf getMentionForRemoteEntity(List objects,
Entity remoteEntity, Bundle remote) {
for (Object o : objects) {
if (o instanceof MentionOf) {
MentionOf ctxt = (MentionOf) o;
org.openprovenance.prov.model.QualifiedName id1 = remoteEntity.getId();
org.openprovenance.prov.model.QualifiedName id2 = remote.getId();
if (ctxt.getGeneralEntity().equals(id1)
&& ctxt.getBundle().equals(id2))
return ctxt;
}
}
return null;
}
public MentionOf getMentionForLocalEntity(Bundle local,
Entity localEntity,
Bundle remote) {
return getMentionForLocalEntity(local.getStatement(),
localEntity, remote);
}
MentionOf getMentionForLocalEntity(List records,
Entity localEntity, Bundle remote) {
for (Statement o : records) {
if (o instanceof MentionOf) {
MentionOf ctxt = (MentionOf) o;
org.openprovenance.prov.model.QualifiedName id1 = localEntity.getId();
org.openprovenance.prov.model.QualifiedName id2 = remote.getId();
if (ctxt.getSpecificEntity().equals(id1)
&& ctxt.getBundle().equals(id2))
return ctxt;
}
}
return null;
}
@SuppressWarnings("rawtypes")
final static private Hashtable fields = new Hashtable();
@SuppressWarnings("rawtypes")
final static private Hashtable types = new Hashtable();
@SuppressWarnings("rawtypes")
static public Hashtable getTypes() {
return types;
}
public Method getterMethod(Statement o, int i)
throws java.lang.NoSuchMethodException {
String field = fields.get(o.getClass())[i];
Method method = o.getClass().getDeclaredMethod("get" + field);
return method;
}
static public String[] getTypes(Object o) {
return fields.get(o.getClass());
}
public Method setterMethod(Statement o, int i, Object val)
throws java.lang.NoSuchMethodException{
String field = fields.get(o.getClass())[i];
Method method = o.getClass()
.getDeclaredMethod("set" + field, types.get(o.getClass())[i]);
return method;
}
static public void putFields(Class cl, String[] str) {
fields.put(cl,str);
}
static public void putTypes(Class cl, Class[] str) {
types.put(cl,str);
}
static {
fields.put(Activity.class, new String[] { "Id", "StartTime", "EndTime", "Other" });
fields.put(Entity.class, new String[] { "Id", "Other" });
fields.put(Agent.class, new String[] { "Id", "Other" });
fields.put(Used.class, new String[] { "Id", "Activity", "Entity",
"Time", "Other" });
fields.put(WasGeneratedBy.class, new String[] { "Id", "Entity",
"Activity", "Time",
"Other" });
fields.put(WasInvalidatedBy.class, new String[] { "Id", "Entity",
"Activity", "Time",
"Other" });
fields.put(WasStartedBy.class, new String[] { "Id", "Activity",
"Trigger", "Starter",
"Time", "Other" });
// 0 , 1 , 2 , 3 , 4 , 5
// length=6
// firstTimeIndex=4
// last index=5
fields.put(WasEndedBy.class, new String[] { "Id", "Activity",
"Trigger", "Ender", "Time",
"Other" });
fields.put(WasInformedBy.class, new String[] { "Id", "Informed", "Informant",
"Other" });
fields.put(WasDerivedFrom.class, new String[] { "Id",
"GeneratedEntity",
"UsedEntity",
"Activity",
"Generation", "Usage",
"Other" });
fields.put(WasInfluencedBy.class, new String[] { "Id", "Influencee",
"Influencer", "Others" });
fields.put(WasAttributedTo.class, new String[] { "Id", "Entity",
"Agent", "Other" });
fields.put(WasAssociatedWith.class, new String[] { "Id", "Activity",
"Agent", "Plan",
"Other" });
fields.put(ActedOnBehalfOf.class, new String[] { "Id", "Delegate",
"Responsible",
"Activity", "Others" });
fields.put(SpecializationOf.class, new String[] { "SpecificEntity",
"GeneralEntity" });
fields.put(AlternateOf.class, new String[] { "Alternate2",
"Alternate2" });
fields.put(HadMember.class, new String[] { "Collection",
"Entity" });
// never use the accessor id for Mention, since it is not defined.
// However, this allows iterations over this data structure to be performed
// like others.
fields.put(MentionOf.class, new String[] { "Id",
"SpecificEntity",
"GeneralEntity",
"Bundle" });
types.put(Entity.class, new Class[] { QualifiedName.class,
Object.class });
types.put(Agent.class, new Class[] { QualifiedName.class,
Object.class });
types.put(Activity.class, new Class[] { QualifiedName.class,
XMLGregorianCalendar.class,
XMLGregorianCalendar.class,
Object.class });
types.put(Used.class, new Class[] { QualifiedName.class, QualifiedName.class,
QualifiedName.class,
XMLGregorianCalendar.class,
Object.class });
types.put(WasGeneratedBy.class,
new Class[] { QualifiedName.class, QualifiedName.class,
QualifiedName.class, XMLGregorianCalendar.class,
Object.class });
types.put(WasInvalidatedBy.class,
new Class[] { QualifiedName.class, QualifiedName.class,
QualifiedName.class, XMLGregorianCalendar.class,
Object.class });
types.put(WasStartedBy.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
XMLGregorianCalendar.class,
Object.class });
types.put(WasEndedBy.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
XMLGregorianCalendar.class,
Object.class });
types.put(WasInformedBy.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(WasDerivedFrom.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(WasInfluencedBy.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(WasAttributedTo.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(WasAssociatedWith.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(ActedOnBehalfOf.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
Object.class });
types.put(SpecializationOf.class, new Class[] { QualifiedName.class,
QualifiedName.class });
types.put(MentionOf.class, new Class[] { QualifiedName.class,
QualifiedName.class,
QualifiedName.class,
QualifiedName.class });
types.put(AlternateOf.class, new Class[] { QualifiedName.class,
QualifiedName.class });
types.put(HadMember.class, new Class[] { QualifiedName.class,
Object.class });
}
@SuppressWarnings("unchecked")
public T addAttributes(T from, T to) {
if (from instanceof Used) {
return (T) p.addAttributes((Used) from, (Used) to);
}
if (from instanceof WasStartedBy) {
return (T) p.addAttributes((WasStartedBy) from, (WasStartedBy) to);
}
if (from instanceof WasEndedBy) {
return (T) p.addAttributes((WasEndedBy) from, (WasEndedBy) to);
}
if (from instanceof WasGeneratedBy) {
return (T) p.addAttributes((WasGeneratedBy) from,
(WasGeneratedBy) to);
}
if (from instanceof WasDerivedFrom) {
return (T) p.addAttributes((WasDerivedFrom) from,
(WasDerivedFrom) to);
}
if (from instanceof WasAssociatedWith) {
return (T) p.addAttributes((WasAssociatedWith) from,
(WasAssociatedWith) to);
}
if (from instanceof WasInvalidatedBy) {
return (T) p.addAttributes((WasInvalidatedBy) from,
(WasInvalidatedBy) to);
}
if (from instanceof WasAttributedTo) {
return (T) p.addAttributes((WasAttributedTo) from,
(WasAttributedTo) to);
}
/*
* if (from instanceof WasRevisionOf) { return (T)
* of.addAttributes((WasRevisionOf)from, (WasRevisionOf)to); } if (from
* instanceof AlternateOf) { return (T)
* of.addAttributes((AlternateOf)from, (AlternateOf)to); } if (from
* instanceof SpecializationOf) { return (T)
* of.addAttributes((SpecializationOf)from, (SpecializationOf)to); }
*/
if (from instanceof WasInformedBy) {
return (T) p.addAttributes((WasInformedBy) from,
(WasInformedBy) to);
}
if (from instanceof WasInfluencedBy) {
return (T) p.addAttributes((WasInfluencedBy) from,
(WasInfluencedBy) to);
}
if (from instanceof ActedOnBehalfOf) {
return (T) p.addAttributes((ActedOnBehalfOf) from,
(ActedOnBehalfOf) to);
}
/*
* if (from instanceof DerivedByInsertionFrom) { return T
* of.addAttributes((DerivedByInsertionFrom)from,
* (DerivedByInsertionFrom)to); }
*/
System.out.println("addAttributes Unknown relation " + from);
throw new UnsupportedOperationException();
}
public int getFirstTimeIndex(Statement o) {
String[] types = getTypes(o);
if (o instanceof Activity) {
return types.length - 3;
} else if (hasNoTime(o)) {
if (o instanceof HasOther) {
return types.length - 1;
} else {
return types.length;
}
} else {
return types.length - 2;
}
}
public int getLastIndex(Object o) {
String[] types = getTypes(o);
return types.length - 1;
}
}
