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org.openscience.cdk.io.cml.CMLResolver Maven / Gradle / Ivy
/* Copyright (C) 1997-2007 Dan Gezelter
*
* Contact: [email protected]
*
* This library is free software; you can redistribute it and/or
* modify it under the terms of the GNU Lesser General Public
* License as published by the Free Software Foundation; either
* version 2.1 of the License, or (at your option) any later version.
*
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with this library; if not, write to the Free Software
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA.
*/
package org.openscience.cdk.io.cml;
import java.io.BufferedReader;
import java.io.InputStream;
import java.io.InputStreamReader;
import org.openscience.cdk.tools.ILoggingTool;
import org.openscience.cdk.tools.LoggingToolFactory;
import org.xml.sax.EntityResolver;
import org.xml.sax.InputSource;
/**
* This class resolves DOCTYPE declaration for Chemical Markup Language (CML)
* files and uses a local version for validation. More information about
* CML can be found at http://www.xml-cml.org/.
*
* @cdk.module io
* @cdk.githash
*
* @author Egon Willighagen
**/
public class CMLResolver implements EntityResolver {
private static ILoggingTool logger = LoggingToolFactory.createLoggingTool(CMLResolver.class);
public CMLResolver() {}
/**
* Not implemented: always returns null.
**/
public InputSource getExternalSubset(String name, String baseURI) {
return null;
}
/**
* Not implemented, but uses resolveEntity(String publicId, String systemId)
* instead.
**/
public InputSource resolveEntity(String name, String publicId, String baseURI, String systemId) {
return resolveEntity(publicId, systemId);
}
/**
* Resolves SYSTEM and PUBLIC identifiers for CML DTDs.
*
* @param publicId the PUBLIC identifier of the DTD (unused)
* @param systemId the SYSTEM identifier of the DTD
* @return the CML DTD as an InputSource or null if id's unresolvable
*/
@Override
public InputSource resolveEntity(String publicId, String systemId) {
logger.debug("CMLResolver: resolving ", publicId, ", ", systemId);
systemId = systemId.toLowerCase();
if ((systemId.indexOf("cml-1999-05-15.dtd") != -1) || (systemId.indexOf("cml.dtd") != -1)
|| (systemId.indexOf("cml1_0.dtd") != -1)) {
logger.info("File has CML 1.0 DTD");
return getCMLType("cml1_0.dtd");
} else if ((systemId.indexOf("cml-2001-04-06.dtd") != -1) || (systemId.indexOf("cml1_0_1.dtd") != -1)
|| (systemId.indexOf("cml_1_0_1.dtd") != -1)) {
logger.info("File has CML 1.0.1 DTD");
return getCMLType("cml1_0_1.dtd");
} else {
logger.warn("Could not resolve systemID: ", systemId);
return null;
}
}
/**
* Returns an InputSource of the appropriate CML DTD. It accepts
* two CML DTD names: cml1_0.dtd and cml1_0_1.dtd. Returns null
* for any other name.
*
* @param type the name of the CML DTD version
* @return the InputSource to the CML DTD
*/
private InputSource getCMLType(String type) {
try {
InputStream ins = this.getClass().getClassLoader()
.getResourceAsStream("org/openscience/cdk/io/cml/data/" + type);
return new InputSource(new BufferedReader(new InputStreamReader(ins)));
} catch (Exception e) {
logger.error("Error while trying to read CML DTD (" + type + "): ", e.getMessage());
logger.debug(e);
return null;
}
}
}
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