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libGPML is a library for reading, writing, manipulation, and conversion of files and data streams in the GPML (Graphical Pathway Markup Language) format.
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/*******************************************************************************
* PathVisio, a tool for data visualization and analysis using biological pathways
* Copyright 2006-2022 BiGCaT Bioinformatics, WikiPathways
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not
* use this file except in compliance with the License. You may obtain a copy
* of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations under
* the License.
******************************************************************************/
package org.pathvisio.libgpml.model;
import java.awt.geom.Point2D;
import java.awt.geom.Rectangle2D;
/**
* Interface for classes which can belong in a {@link Group}. This class is
* implemented by {@link ShapedElement} and {@link LineElement}.
*
* @author finterly
*/
public interface Groupable extends Drawable {
/**
* Returns the parent group of this pathway element. In GPML, groupRef refers to
* the elementId (formerly groupId) of the parent gpml:Group.
*
* @return groupRef the parent group of this pathway element.
*/
public Group getGroupRef();
/**
* Checks whether this pathway element belongs to a group.
*
* @return true if and only if the group of this pathway element is effective.
*/
public boolean hasGroupRef();
/**
* Verifies if given parent group is new and valid. Sets the parent group of the
* pathway element. Adds this pathway element to the the pathwayElements list of
* the new parent group. If there is an old parent group, this pathway element
* is removed from its pathwayElements list.
*
* @param groupRef the new parent group to set.
*/
public void setGroupRefTo(Group groupRef);
/**
* Unsets the parent group, if any, from this pathway element.
*/
public void unsetGroupRef();
/**
* Returns the rectangular bounds of the object after rotation is applied.
*
* @return rectangle2d the rectangular bounds.
*/
public Rectangle2D getRotatedBounds();
/**
* Get the rectangular bounds of the object without rotation taken into account.
*
* @return rectangle2d the rectangular bounds.
*/
public Rectangle2D getBounds();
/**
* Returns the center x coordinate of the bounding box around (start, end) this
* pathway element.
*
* @return the center x coordinate.
*/
public double getCenterX();
/**
* Sets the x position of the center of the pathway element.
*
* @param v the center x coordinate to set.
*/
public void setCenterX(double v);
/**
* Returns the center y coordinate of the bounding box around (start, end) this
* pathway element.
*
* @return the center y coordinate
*/
public double getCenterY();
/**
* Sets the y position of the center of the pathway element.
*
* @param v the center y coordinate to set.
*/
public void setCenterY(double v);
/**
* Calculates and returns the width of the bounding box around (start, end) this
* pathway element.
*
* @return width the width.
*/
public double getWidth();
/**
* Calculates and returns the height of the bounding box around (start, end)
* this pathway element.
*
* @return height the height.
*/
public double getHeight();
/**
* Returns the left x coordinate of the bounding box around (start, end) this
* pathway element.
*
* @return left the left x coordinate.
*/
public double getLeft();
/**
* Sets the position of the left side of the rectangular bounds of the pathway
* element.
*
* @param v the left x coordinate to set.
*/
public void setLeft(double v);
/**
* Returns the top y coordinate of the bounding box around (start, end) this
* pathway element.
*
* @return the top y coordinate.
*/
public double getTop();
/**
* Sets the position of the top side of the rectangular bounds of the pathway
* element.
*
* @param v the top y coordinate to set.
*/
public void setTop(double v);
/**
* Converts a point to pathway coordinates (relative to the pathway).
*
* @param p the point2d.
* @return the absolute point2d coordinate.
*/
@Override
public Point2D toAbsoluteCoordinate(Point2D p);
/**
* Converts a point to shape coordinates (relative to the bounds of the object)
*
* @param p a point in absolute model coordinates
* @return the same point relative to the bounding box of this pathway element:
* -1,-1 meaning the top-left corner, 1,1 meaning the bottom right
* corner, and 0,0 meaning the center.
*/
@Override
public Point2D toRelativeCoordinate(Point2D p);
}