org.phenopackets.schema.v1.Phenopackets Maven / Gradle / Ivy

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A Protobuf schema for capturing clinical phenotypes
There is a newer version: 2.0.2
// Generated by the protocol buffer compiler.  DO NOT EDIT!
// source: phenopackets.proto

package org.phenopackets.schema.v1;

public final class Phenopackets {
  private Phenopackets() {}
  public static void registerAllExtensions(
      com.google.protobuf.ExtensionRegistryLite registry) {
  }

  public static void registerAllExtensions(
      com.google.protobuf.ExtensionRegistry registry) {
    registerAllExtensions(
        (com.google.protobuf.ExtensionRegistryLite) registry);
  }
  static final com.google.protobuf.Descriptors.Descriptor
    internal_static_org_phenopackets_schema_v1_Phenopacket_descriptor;
  static final 
    com.google.protobuf.GeneratedMessageV3.FieldAccessorTable
      internal_static_org_phenopackets_schema_v1_Phenopacket_fieldAccessorTable;
  static final com.google.protobuf.Descriptors.Descriptor
    internal_static_org_phenopackets_schema_v1_Family_descriptor;
  static final 
    com.google.protobuf.GeneratedMessageV3.FieldAccessorTable
      internal_static_org_phenopackets_schema_v1_Family_fieldAccessorTable;
  static final com.google.protobuf.Descriptors.Descriptor
    internal_static_org_phenopackets_schema_v1_Cohort_descriptor;
  static final 
    com.google.protobuf.GeneratedMessageV3.FieldAccessorTable
      internal_static_org_phenopackets_schema_v1_Cohort_fieldAccessorTable;

  public static com.google.protobuf.Descriptors.FileDescriptor
      getDescriptor() {
    return descriptor;
  }
  private static  com.google.protobuf.Descriptors.FileDescriptor
      descriptor;
  static {
    java.lang.String[] descriptorData = {
      "\n\022phenopackets.proto\022\032org.phenopackets.s" +
      "chema.v1\032\nbase.proto\"\221\004\n\013Phenopacket\022\n\n\002" +
      "id\030\001 \001(\t\022<\n\007subject\030\002 \001(\0132+.org.phenopac" +
      "kets.schema.v1.core.Individual\022O\n\023phenot" +
      "ypic_features\030\003 \003(\01322.org.phenopackets.s" +
      "chema.v1.core.PhenotypicFeature\022>\n\nbiosa" +
      "mples\030\004 \003(\0132*.org.phenopackets.schema.v1" +
      ".core.Biosample\0224\n\005genes\030\005 \003(\0132%.org.phe" +
      "nopackets.schema.v1.core.Gene\022:\n\010variant" +
      "s\030\006 \003(\0132(.org.phenopackets.schema.v1.cor" +
      "e.Variant\022:\n\010diseases\030\007 \003(\0132(.org.phenop" +
      "ackets.schema.v1.core.Disease\022;\n\thts_fil" +
      "es\030\010 \003(\0132(.org.phenopackets.schema.v1.co" +
      "re.HtsFile\022<\n\tmeta_data\030\t \001(\0132).org.phen" +
      "opackets.schema.v1.core.MetaData\"\302\002\n\006Fam" +
      "ily\022\n\n\002id\030\001 \001(\t\0228\n\007proband\030\002 \001(\0132\'.org.p" +
      "henopackets.schema.v1.Phenopacket\022:\n\trel" +
      "atives\030\003 \003(\0132\'.org.phenopackets.schema.v" +
      "1.Phenopacket\022;\n\010pedigree\030\004 \001(\0132).org.ph" +
      "enopackets.schema.v1.core.Pedigree\022;\n\tht" +
      "s_files\030\005 \003(\0132(.org.phenopackets.schema." +
      "v1.core.HtsFile\022<\n\tmeta_data\030\006 \001(\0132).org" +
      ".phenopackets.schema.v1.core.MetaData\"\336\001" +
      "\n\006Cohort\022\n\n\002id\030\001 \001(\t\022\023\n\013description\030\002 \001(" +
      "\t\0228\n\007members\030\003 \003(\0132\'.org.phenopackets.sc" +
      "hema.v1.Phenopacket\022;\n\thts_files\030\004 \003(\0132(" +
      ".org.phenopackets.schema.v1.core.HtsFile" +
      "\022<\n\tmeta_data\030\005 \001(\0132).org.phenopackets.s" +
      "chema.v1.core.MetaDataB\036\n\032org.phenopacke" +
      "ts.schema.v1P\001b\006proto3"
    };
    descriptor = com.google.protobuf.Descriptors.FileDescriptor
      .internalBuildGeneratedFileFrom(descriptorData,
        new com.google.protobuf.Descriptors.FileDescriptor[] {
          org.phenopackets.schema.v1.core.Base.getDescriptor(),
        });
    internal_static_org_phenopackets_schema_v1_Phenopacket_descriptor =
      getDescriptor().getMessageTypes().get(0);
    internal_static_org_phenopackets_schema_v1_Phenopacket_fieldAccessorTable = new
      com.google.protobuf.GeneratedMessageV3.FieldAccessorTable(
        internal_static_org_phenopackets_schema_v1_Phenopacket_descriptor,
        new java.lang.String[] { "Id", "Subject", "PhenotypicFeatures", "Biosamples", "Genes", "Variants", "Diseases", "HtsFiles", "MetaData", });
    internal_static_org_phenopackets_schema_v1_Family_descriptor =
      getDescriptor().getMessageTypes().get(1);
    internal_static_org_phenopackets_schema_v1_Family_fieldAccessorTable = new
      com.google.protobuf.GeneratedMessageV3.FieldAccessorTable(
        internal_static_org_phenopackets_schema_v1_Family_descriptor,
        new java.lang.String[] { "Id", "Proband", "Relatives", "Pedigree", "HtsFiles", "MetaData", });
    internal_static_org_phenopackets_schema_v1_Cohort_descriptor =
      getDescriptor().getMessageTypes().get(2);
    internal_static_org_phenopackets_schema_v1_Cohort_fieldAccessorTable = new
      com.google.protobuf.GeneratedMessageV3.FieldAccessorTable(
        internal_static_org_phenopackets_schema_v1_Cohort_descriptor,
        new java.lang.String[] { "Id", "Description", "Members", "HtsFiles", "MetaData", });
    org.phenopackets.schema.v1.core.Base.getDescriptor();
  }

  // @@protoc_insertion_point(outer_class_scope)
}