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/*
 * Copyright 2010 Henry Coles
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 * http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing,
 * software distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and limitations under the License.
 */
package org.pitest.mutationtest.config;

import org.pitest.classpath.ClassFilter;
import org.pitest.classpath.ClassPath;
import org.pitest.classpath.ClassPathRoot;
import org.pitest.classpath.PathFilter;
import org.pitest.classpath.ProjectClassPaths;
import org.pitest.functional.prelude.Prelude;
import org.pitest.help.Help;
import org.pitest.help.PitHelpError;
import org.pitest.mutationtest.build.PercentAndConstantTimeoutStrategy;
import org.pitest.mutationtest.incremental.FileWriterFactory;
import org.pitest.mutationtest.incremental.WriterFactory;
import org.pitest.testapi.TestGroupConfig;
import org.pitest.testapi.execute.Pitest;
import org.pitest.util.Glob;
import org.pitest.util.ResultOutputStrategy;
import org.pitest.util.Unchecked;
import org.pitest.util.Verbosity;

import java.io.File;
import java.io.FileInputStream;
import java.io.IOException;
import java.io.InputStreamReader;
import java.io.Reader;
import java.nio.charset.Charset;
import java.nio.charset.StandardCharsets;
import java.nio.file.Path;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
import java.util.LinkedHashSet;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Properties;
import java.util.StringJoiner;
import java.util.function.Predicate;
import java.util.stream.Collectors;

import static org.pitest.functional.Streams.asStream;
import static org.pitest.functional.prelude.Prelude.not;
import static org.pitest.functional.prelude.Prelude.or;

// FIXME move all logic to SettingsFactory and turn into simple bean

/**
 * Big ball of user supplied options to configure various aspects of mutation
 * testing.
 *
 */
public class ReportOptions {

  public static final Collection LOGGING_CLASSES                = Arrays
      .asList(
          "java.util.logging",
          "org.apache.log4j",
          "org.apache.logging.log4j",
          "org.slf4j",
          "org.apache.commons.logging",
          "org.jboss.logging");

  private Collection             targetClasses;
  private Collection             excludedMethods                = Collections
      .emptyList();

  private Collection             excludedClasses                = Collections
      .emptyList();

  private Collection>  excludedTestClasses            = Collections
      .emptyList();

  private Collection             codePaths;

  private String                         reportDir;

  private File                           historyInputLocation;
  private File                           historyOutputLocation;

  private Collection               sourceDirs;
  private Collection             classPathElements;
  private Collection             mutators;
  private Collection             features;


  private String                         argLine;
  private final List             jvmArgs                        = new ArrayList<>();

  private int                            numberOfThreads                = 0;
  private float                          timeoutFactor                  = PercentAndConstantTimeoutStrategy.DEFAULT_FACTOR;
  private long                           timeoutConstant                = PercentAndConstantTimeoutStrategy.DEFAULT_CONSTANT;

  private Collection>  targetTests;

  private Collection             loggingClasses                 = new ArrayList<>();

  private Verbosity                      verbosity                      = Verbosity.DEFAULT;
  private boolean                        failWhenNoMutations            = false;
  private boolean                        skipFailingTests               = false;

  private final Collection       outputs                        = new LinkedHashSet<>();

  private TestGroupConfig                groupConfig;

  private boolean                        fullMutationMatrix            = false;

  private int                            mutationUnitSize;
  private boolean                        shouldCreateTimestampedReports = true;
  private boolean                        detectInlinedCode              = false;
  private boolean                        exportLineCoverage             = false;
  private int                            mutationThreshold;
  private int                            coverageThreshold;
  private int                            testStrengthThreshold;

  private String                         mutationEngine                 = "gregor";

  private String                         javaExecutable;

  private boolean                        includeLaunchClasspath         = true;

  private boolean                        reportCoverage                 = true;

  private Properties                     properties;

  private int maxSurvivors;

  private Collection             excludedRunners                = new ArrayList<>();
  private Collection             includedTestMethods            = new ArrayList<>();

  private String                         testPlugin                     = "";
  
  private boolean                        useClasspathJar;

  private Path                           projectBase;
  private Charset inputEncoding;
  private Charset outputEncoding;

  private boolean arcmutateMissing = true;

  // currently used only via maven
  private Map environmentVariables = new HashMap<>();


  public Verbosity getVerbosity() {
    return this.verbosity;
  }

  /**
   * @return the reportDir
   */
  public String getReportDir() {
    return this.reportDir;
  }

  /**
   * @param reportDir
   *          the reportDir to set
   */
  public void setReportDir(final String reportDir) {
    this.reportDir = reportDir;
  }

  /**
   * @return the sourceDirs
   */
  public Collection getSourcePaths() {
    return this.sourceDirs;
  }

  @Deprecated
  public Collection getSourceDirs() {
    return sourceDirs.stream()
            .map(Path::toFile)
            .collect(Collectors.toList());
  }

  public Collection getClassPathElements() {
    return this.classPathElements;
  }

  public void setClassPathElements(final Collection classPathElements) {
    this.classPathElements = classPathElements;
  }

  /**
   * @param sourceDirs
   *          the sourceDirs to set
   */
  public void setSourceDirs(final Collection sourceDirs) {
    this.sourceDirs = sourceDirs;
  }

  /**
   * @return the mutators
   */
  public Collection getMutators() {
    return this.mutators;
  }

  /**
   * @param mutators
   *          the mutators to set
   */
  public void setMutators(final Collection mutators) {
    this.mutators = mutators;
  }


  public Collection getFeatures() {
    return this.features;
  }

  public void setFeatures(Collection features) {
    this.features = features;
  }

  public List getJvmArgs() {
    return this.jvmArgs;
  }

  public void addChildJVMArgs(final List args) {
    this.jvmArgs.addAll(args);
  }

  public String getArgLine() {
    return argLine;
  }

  public void setArgLine(String argLine) {
    this.argLine = argLine;
  }

  public ClassPath getClassPath() {
    if (this.classPathElements != null) {
      return createClassPathFromElements();
    } else {
      return new ClassPath();
    }
  }

  private ClassPath createClassPathFromElements() {
    return new ClassPath(asStream(this.classPathElements)
            .map(File::new)
            .collect(Collectors.toList()));
  }

  public Collection getTargetClasses() {
    return this.targetClasses;
  }


  public Predicate getTargetClassesFilter() {
    final Predicate filter = Prelude.and(or(Glob.toGlobPredicates(this.targetClasses)),
        not(isBlackListed(Glob.toGlobPredicates(ReportOptions.this.excludedClasses))));
    checkNotTryingToMutateSelf(filter);
    return filter;
  }

  private void checkNotTryingToMutateSelf(final Predicate filter) {
    if (filter.test(Pitest.class.getName())) {
      throw new PitHelpError(Help.BAD_FILTER);
    }
  }

  public void setTargetClasses(final Collection targetClasses) {
    this.targetClasses = targetClasses;
  }

  public void setTargetTests(
      final Collection> targetTestsPredicates) {
    this.targetTests = targetTestsPredicates;
  }

  public int getNumberOfThreads() {
    return this.numberOfThreads;
  }

  public void setNumberOfThreads(final int numberOfThreads) {
    this.numberOfThreads = numberOfThreads;
  }

  public float getTimeoutFactor() {
    return this.timeoutFactor;
  }

  public long getTimeoutConstant() {
    return this.timeoutConstant;
  }

  public void setTimeoutConstant(final long timeoutConstant) {
    this.timeoutConstant = timeoutConstant;
  }

  public void setTimeoutFactor(final float timeoutFactor) {
    this.timeoutFactor = timeoutFactor;
  }

  public Collection> getTargetTests() {
    return this.targetTests;
  }

  public Predicate getTargetTestsFilter() {
    if ((this.targetTests == null) || this.targetTests.isEmpty()) {
      // If target tests is not explicitly set we assume that the
      // target classes predicate covers both classes and tests
      return Prelude.and(or(Glob.toGlobPredicates(this.targetClasses)),
          not(isBlackListed(ReportOptions.this.excludedTestClasses)));
    } else {
      return Prelude.and(or(this.targetTests),
          not(isBlackListed(ReportOptions.this.excludedTestClasses)));
    }
  }

  private static Predicate isBlackListed(
      final Collection> excludedClasses) {
        return or(excludedClasses);
  }

  public Collection getLoggingClasses() {
    if (this.loggingClasses.isEmpty()) {
      return LOGGING_CLASSES;
    } else {
      return this.loggingClasses;
    }
  }

  public void setLoggingClasses(final Collection loggingClasses) {
    this.loggingClasses = loggingClasses;
  }

  public Collection getExcludedMethods() {
    return this.excludedMethods;
  }

  public void setExcludedMethods(
      final Collection excludedMethods) {
    this.excludedMethods = excludedMethods;
  }

  public void setVerbosity(Verbosity verbose) {
    this.verbosity = verbose;
  }

  public void setExcludedClasses(
      final Collection excludedClasses) {
    this.excludedClasses = excludedClasses;
  }

  public void setExcludedTestClasses(
      final Collection> excludedClasses) {
    this.excludedTestClasses = excludedClasses;
  }

  public void addOutputFormats(final Collection formats) {
    this.outputs.addAll(formats);
  }

  public Collection getOutputFormats() {
    return this.outputs;
  }

  public Collection getExcludedClasses() {
    return this.excludedClasses;
  }

  public Collection> getExcludedTestClasses() {
    return this.excludedTestClasses;
  }

  public boolean shouldFailWhenNoMutations() {
    return this.failWhenNoMutations;
  }

  public void setFailWhenNoMutations(final boolean failWhenNoMutations) {
    this.failWhenNoMutations = failWhenNoMutations;
  }

  public boolean skipFailingTests() {
    return skipFailingTests;
  }

  public void setSkipFailingTests(final boolean skipFailingTests) {
    this.skipFailingTests = skipFailingTests;
  }

  public ProjectClassPaths getMutationClassPaths() {

    return new ProjectClassPaths(this.getClassPath(), createClassesFilter(),
        createPathFilter());
  }

  public ClassFilter createClassesFilter() {
    return new ClassFilter(this.getTargetTestsFilter(),
        this.getTargetClassesFilter());
  }

  private PathFilter createPathFilter() {
    return new PathFilter(createCodePathFilter(),
        not(new DefaultDependencyPathPredicate()));
  }

  private Predicate createCodePathFilter() {
    if ((this.codePaths != null) && !this.codePaths.isEmpty()) {
      return new PathNamePredicate(Prelude.or(Glob
          .toGlobPredicates(this.codePaths)));
    } else {
      return new DefaultCodePathPredicate();
    }
  }

  public Collection getCodePaths() {
    return this.codePaths;
  }

  public void setCodePaths(final Collection codePaths) {
    this.codePaths = codePaths;
  }

  public void setGroupConfig(final TestGroupConfig groupConfig) {
    this.groupConfig = groupConfig;
  }

  public TestGroupConfig getGroupConfig() {
    return this.groupConfig;
  }

  public void setFullMutationMatrix(final boolean fullMutationMatrix) {
    this.fullMutationMatrix = fullMutationMatrix;
  }

  public boolean isFullMutationMatrix() {
    return fullMutationMatrix;
  }

  public int getMutationUnitSize() {
    return this.mutationUnitSize;
  }

  public void setMutationUnitSize(final int size) {
    this.mutationUnitSize = size;
  }

  public ResultOutputStrategy getReportDirectoryStrategy() {
    return new DirectoryResultOutputStrategy(getReportDir(),
        pickDirectoryStrategy());
  }

  public void setShouldCreateTimestampedReports(
      final boolean shouldCreateTimestampedReports) {
    this.shouldCreateTimestampedReports = shouldCreateTimestampedReports;
  }

  private ReportDirCreationStrategy pickDirectoryStrategy() {
    if (this.shouldCreateTimestampedReports) {
      return new DatedDirectoryReportDirCreationStrategy();
    } else {
      return new UndatedReportDirCreationStrategy();
    }
  }

  public boolean shouldCreateTimeStampedReports() {
    return this.shouldCreateTimestampedReports;
  }

  public boolean isDetectInlinedCode() {
    return this.detectInlinedCode;
  }

  public void setDetectInlinedCode(final boolean b) {
    this.detectInlinedCode = b;
  }

  public Optional createHistoryWriter() {
    if (this.historyOutputLocation == null) {
      return Optional.empty();
    }

    return Optional.of(new FileWriterFactory(this.historyOutputLocation));
  }

  public Optional createHistoryReader() {
    if (this.historyInputLocation == null) {
      return Optional.empty();
    }

    try {
      if (this.historyInputLocation.exists()
          && (this.historyInputLocation.length() > 0)) {
        return Optional.ofNullable(new InputStreamReader(new FileInputStream(
            this.historyInputLocation), StandardCharsets.UTF_8));
      }
      return Optional.empty();
    } catch (final IOException ex) {
      throw Unchecked.translateCheckedException(ex);
    }
  }

  public void setHistoryInputLocation(final File historyInputLocation) {
    this.historyInputLocation = historyInputLocation;
  }

  public void setHistoryOutputLocation(final File historyOutputLocation) {
    this.historyOutputLocation = historyOutputLocation;
  }

  public File getHistoryInputLocation() {
    return this.historyInputLocation;
  }

  public File getHistoryOutputLocation() {
    return this.historyOutputLocation;
  }

  public void setExportLineCoverage(final boolean value) {
    this.exportLineCoverage = value;
  }

  public boolean shouldExportLineCoverage() {
    return this.exportLineCoverage;
  }

  public int getMutationThreshold() {
    return this.mutationThreshold;
  }

  public void setMutationThreshold(final int value) {
    this.mutationThreshold = value;
  }

  public String getMutationEngine() {
    return this.mutationEngine;
  }

  public void setMutationEngine(final String mutationEngine) {
    this.mutationEngine = mutationEngine;
  }

  public int getCoverageThreshold() {
    return this.coverageThreshold;
  }

  public void setCoverageThreshold(final int coverageThreshold) {
    this.coverageThreshold = coverageThreshold;
  }

  public int getTestStrengthThreshold() {
    return this.testStrengthThreshold;
  }

  public void setTestStrengthThreshold(final int testStrengthThreshold) {
    this.testStrengthThreshold = testStrengthThreshold;
  }


  public String getJavaExecutable() {
    return this.javaExecutable;
  }

  public void setJavaExecutable(final String javaExecutable) {
    this.javaExecutable = javaExecutable;
  }

  public void setIncludeLaunchClasspath(final boolean b) {
    this.includeLaunchClasspath = b;
  }

  public boolean isIncludeLaunchClasspath() {
    return this.includeLaunchClasspath;
  }

  public Properties getFreeFormProperties() {
    return this.properties;
  }

  public void setFreeFormProperties(Properties props) {
    this.properties = props;
  }

  public int getMaximumAllowedSurvivors() {
    return this.maxSurvivors;
  }

  public void setMaximumAllowedSurvivors(int maxSurvivors) {
    this.maxSurvivors = maxSurvivors;
  }

  public Collection getExcludedRunners() {
    return this.excludedRunners;
  }

  public Collection getIncludedTestMethods() {
    return this.includedTestMethods;
  }

  public void setExcludedRunners(Collection excludedRunners) {
    this.excludedRunners = excludedRunners;
  }

  public void setIncludedTestMethods(Collection includedTestMethods) {
    this.includedTestMethods = includedTestMethods;
  }

  /**
   * Creates a serializable subset of data for use in child processes
   */
  public TestPluginArguments createMinionSettings() {
    return new TestPluginArguments(this.getGroupConfig(), this.getExcludedRunners(),
            this.getIncludedTestMethods(), this.skipFailingTests());
  }

  public boolean useClasspathJar() {
    return useClasspathJar;
  }

  public void setUseClasspathJar(boolean useClasspathJar) {
    this.useClasspathJar = useClasspathJar;
  }

  public Path getProjectBase() {
    return projectBase;
  }

  public void setProjectBase(Path projectBase) {
    this.projectBase = projectBase;
  }

  public Charset getInputEncoding() {
    return this.inputEncoding;
  }

  public void setInputEncoding(Charset inputEncoding) {
    this.inputEncoding = inputEncoding;
  }

  public Charset getOutputEncoding() {
    return this.outputEncoding;
  }

  public void setOutputEncoding(Charset outputEncoding) {
    this.outputEncoding = outputEncoding;
  }

  public boolean shouldReportCoverage() {
    return reportCoverage;
  }

  public void setReportCoverage(boolean reportCoverage) {
    this.reportCoverage = reportCoverage;
  }

  public Map getEnvironmentVariables() {
    return environmentVariables;
  }

  public boolean isArcmutateMissing() {
    return arcmutateMissing;
  }

  public void setArcmutateMissing(boolean arcmutateMissing) {
    this.arcmutateMissing = arcmutateMissing;
  }

  @Override
  public String toString() {
    return new StringJoiner(", ", ReportOptions.class.getSimpleName() + "[", "]")
            .add("targetClasses=" + targetClasses)
            .add("excludedMethods=" + excludedMethods)
            .add("excludedClasses=" + excludedClasses)
            .add("excludedTestClasses=" + excludedTestClasses)
            .add("codePaths=" + codePaths)
            .add("reportDir='" + reportDir + "'")
            .add("historyInputLocation=" + historyInputLocation)
            .add("historyOutputLocation=" + historyOutputLocation)
            .add("sourceDirs=" + sourceDirs)
            .add("classPathElements=" + classPathElements)
            .add("mutators=" + mutators)
            .add("features=" + features)
            .add("jvmArgs=" + jvmArgs)
            .add("argLine=" + argLine)
            .add("numberOfThreads=" + numberOfThreads)
            .add("timeoutFactor=" + timeoutFactor)
            .add("timeoutConstant=" + timeoutConstant)
            .add("targetTests=" + targetTests)
            .add("loggingClasses=" + loggingClasses)
            .add("verbosity=" + verbosity)
            .add("failWhenNoMutations=" + failWhenNoMutations)
            .add("skipFailingTests=" + skipFailingTests)
            .add("outputs=" + outputs)
            .add("groupConfig=" + groupConfig)
            .add("fullMutationMatrix=" + fullMutationMatrix)
            .add("mutationUnitSize=" + mutationUnitSize)
            .add("shouldCreateTimestampedReports=" + shouldCreateTimestampedReports)
            .add("detectInlinedCode=" + detectInlinedCode)
            .add("exportLineCoverage=" + exportLineCoverage)
            .add("mutationThreshold=" + mutationThreshold)
            .add("coverageThreshold=" + coverageThreshold)
            .add("testStrengthThreshold=" + testStrengthThreshold)
            .add("mutationEngine='" + mutationEngine + "'")
            .add("javaExecutable='" + javaExecutable + "'")
            .add("includeLaunchClasspath=" + includeLaunchClasspath)
            .add("properties=" + properties)
            .add("maxSurvivors=" + maxSurvivors)
            .add("excludedRunners=" + excludedRunners)
            .add("includedTestMethods=" + includedTestMethods)
            .add("testPlugin='" + testPlugin + "'")
            .add("useClasspathJar=" + useClasspathJar)
            .add("projectBase=" + projectBase)
            .add("inputEncoding=" + inputEncoding)
            .add("outputEncoding=" + outputEncoding)
            .add("reportCoverage=" + reportCoverage)
            .add("arcmutateMissing=" + arcmutateMissing)
            .toString();
  }

}




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