org.rcsb.cif.schema.mm.EmDepui Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Some internal items to power the deposition interface
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EmDepui extends DelegatingCategory {
public EmDepui(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "composite_map_deposition":
return getCompositeMapDeposition();
case "depositor_hold_instructions":
return getDepositorHoldInstructions();
case "entry_id":
return getEntryId();
case "macromolecule_description":
return getMacromoleculeDescription();
case "obsolete_instructions":
return getObsoleteInstructions();
case "same_authors_as_pdb":
return getSameAuthorsAsPdb();
case "same_title_as_pdb":
return getSameTitleAsPdb();
default:
return new DelegatingColumn(column);
}
}
/**
* Indicates whether the authors have declared that this is a composite map deposition
* @return StrColumn
*/
public StrColumn getCompositeMapDeposition() {
return delegate.getColumn("composite_map_deposition", DelegatingStrColumn::new);
}
/**
* Choose the manner in which you would like the map and associated files (half
* maps, additional maps, masks, FSC curves, structure factors, layer lines, and
* images) to be released. Release of these files can be delayed either until
* publication of the associated primary citation or until one year after completion
* of the deposition. It is the responsibility of the depositor to notify the EMDB when
* the primary citation has been published. Please note that map-associated
* experimental information and metadata (header data) are made available to the
* public when an entry is placed on hold.
* @return StrColumn
*/
public StrColumn getDepositorHoldInstructions() {
return delegate.getColumn("depositor_hold_instructions", DelegatingStrColumn::new);
}
/**
* PRIMARY KEY
* @return StrColumn
*/
public StrColumn getEntryId() {
return delegate.getColumn("entry_id", DelegatingStrColumn::new);
}
/**
* Indicates whether the authors are providing a macromolecule level description of their sample
* @return StrColumn
*/
public StrColumn getMacromoleculeDescription() {
return delegate.getColumn("macromolecule_description", DelegatingStrColumn::new);
}
/**
* Instruction for annotators on why a previous released entry should be obsoleted.
* Example of valid request:
* * Author wants to replace a map that has already been released, following discovery of a processing error
* Examples of invalid requests:
* * Someone other than the author wants to obsolete a map.
* * Legal conflict of interest
* Obsoletion is not required for the following actions:
* * to change released metadata info.
* * to update the map of an HPUB entry.
* * to change the hand of a released map.
* * to deposit an improved version of a released map.
* @return StrColumn
*/
public StrColumn getObsoleteInstructions() {
return delegate.getColumn("obsolete_instructions", DelegatingStrColumn::new);
}
/**
* Indicates whether the authors for the EMDB entry are the same as for the PDB entry
* in a joint map + model deposition
* @return StrColumn
*/
public StrColumn getSameAuthorsAsPdb() {
return delegate.getColumn("same_authors_as_pdb", DelegatingStrColumn::new);
}
/**
* Indicates whether the title for the EMDB entry is the same as for the PDB entry
* in a joint map + model deposition
* @return StrColumn
*/
public StrColumn getSameTitleAsPdb() {
return delegate.getColumn("same_title_as_pdb", DelegatingStrColumn::new);
}
}