org.rcsb.cif.schema.mm.PdbxValBond Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* The PDBX_VAL_BOND category lists the covalent bond angles
* in this entry deviating by greater than 6*sigma from
* standard values.
*
* This is a completely derived category. Do not edit.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxValBond extends DelegatingCategory {
public PdbxValBond(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "id":
return getId();
case "model_id":
return getModelId();
case "auth_asym_id_1":
return getAuthAsymId1();
case "auth_atom_id_1":
return getAuthAtomId1();
case "auth_comp_id_1":
return getAuthCompId1();
case "auth_seq_id_1":
return getAuthSeqId1();
case "auth_atom_id_2":
return getAuthAtomId2();
case "auth_asym_id_2":
return getAuthAsymId2();
case "auth_comp_id_2":
return getAuthCompId2();
case "auth_seq_id_2":
return getAuthSeqId2();
case "auth_PDB_insert_id_1":
return getAuthPDBInsertId1();
case "auth_PDB_insert_id_2":
return getAuthPDBInsertId2();
case "label_alt_id_1":
return getLabelAltId1();
case "label_asym_id_1":
return getLabelAsymId1();
case "label_atom_id_1":
return getLabelAtomId1();
case "label_comp_id_1":
return getLabelCompId1();
case "label_seq_id_1":
return getLabelSeqId1();
case "label_alt_id_2":
return getLabelAltId2();
case "label_asym_id_2":
return getLabelAsymId2();
case "label_atom_id_2":
return getLabelAtomId2();
case "label_comp_id_2":
return getLabelCompId2();
case "label_seq_id_2":
return getLabelSeqId2();
case "bond":
return getBond();
case "bond_deviation":
return getBondDeviation();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_val_bond.id must uniquely identify
* each item in the PDBX_VAL_BOND list.
* This is an integer serial number.
* @return IntColumn
*/
public IntColumn getId() {
return delegate.getColumn("id", DelegatingIntColumn::new);
}
/**
* The model number for the given bond
* @return IntColumn
*/
public IntColumn getModelId() {
return delegate.getColumn("model_id", DelegatingIntColumn::new);
}
/**
* identifier of the first of the two atom sites that
* define the covalent bond.
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAsymId1() {
return delegate.getColumn("auth_asym_id_1", DelegatingStrColumn::new);
}
/**
* identifier of the first of the two atom sites that
* define the covalent bond.
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAtomId1() {
return delegate.getColumn("auth_atom_id_1", DelegatingStrColumn::new);
}
/**
* identifier of the first of the two atom sites that
* define the covalent bond.
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthCompId1() {
return delegate.getColumn("auth_comp_id_1", DelegatingStrColumn::new);
}
/**
* identifier of the first of the two atom sites that
* define the covalent bond.
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthSeqId1() {
return delegate.getColumn("auth_seq_id_1", DelegatingStrColumn::new);
}
/**
* identifier of the second of the two atom sites
* that define the covalent bond.
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAtomId2() {
return delegate.getColumn("auth_atom_id_2", DelegatingStrColumn::new);
}
/**
* identifier of the second of the two atom sites
* that define the covalent bond.
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAsymId2() {
return delegate.getColumn("auth_asym_id_2", DelegatingStrColumn::new);
}
/**
* identifier of the second of the two atom sites
* that define the covalent bond.
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthCompId2() {
return delegate.getColumn("auth_comp_id_2", DelegatingStrColumn::new);
}
/**
* identifier of the second of the two atom sites
* that define the covalent bond.
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthSeqId2() {
return delegate.getColumn("auth_seq_id_2", DelegatingStrColumn::new);
}
/**
* Optional identifier of the first of the two atom sites that
* define the covalent bond.
* @return StrColumn
*/
public StrColumn getAuthPDBInsertId1() {
return delegate.getColumn("auth_PDB_insert_id_1", DelegatingStrColumn::new);
}
/**
* Optional identifier of the second of the two atom sites that
* define the covalent bond.
* @return StrColumn
*/
public StrColumn getAuthPDBInsertId2() {
return delegate.getColumn("auth_PDB_insert_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the bond
* connection.
* @return StrColumn
*/
public StrColumn getLabelAltId1() {
return delegate.getColumn("label_alt_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAsymId1() {
return delegate.getColumn("label_asym_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the bond
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getLabelAtomId1() {
return delegate.getColumn("label_atom_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelCompId1() {
return delegate.getColumn("label_comp_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getLabelSeqId1() {
return delegate.getColumn("label_seq_id_1", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 2 of the bond
* connection.
* @return StrColumn
*/
public StrColumn getLabelAltId2() {
return delegate.getColumn("label_alt_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAsymId2() {
return delegate.getColumn("label_asym_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the bond
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getLabelAtomId2() {
return delegate.getColumn("label_atom_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelCompId2() {
return delegate.getColumn("label_comp_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the bond
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getLabelSeqId2() {
return delegate.getColumn("label_seq_id_2", DelegatingIntColumn::new);
}
/**
* The value of the bond distance deviating by more than
* 6*RMSD from the standard dictionary value.
* @return FloatColumn
*/
public FloatColumn getBond() {
return delegate.getColumn("bond", DelegatingFloatColumn::new);
}
/**
* The value of the deviation from ideal
* for the defined covalent bond for the two atoms defined.
* @return FloatColumn
*/
public FloatColumn getBondDeviation() {
return delegate.getColumn("bond_deviation", DelegatingFloatColumn::new);
}
}