org.rcsb.cif.schema.mm.StructBiolGen Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the STRUCT_BIOL_GEN category record details about
* the generation of each biological unit. The STRUCT_BIOL_GEN
* data items provide the specifications of the components that
* constitute that biological unit, which may include symmetry
* elements.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructBiolGen extends DelegatingCategory {
public StructBiolGen(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "asym_id":
return getAsymId();
case "biol_id":
return getBiolId();
case "details":
return getDetails();
case "symmetry":
return getSymmetry();
case "pdbx_full_symmetry_operation":
return getPdbxFullSymmetryOperation();
case "pdbx_PDB_order":
return getPdbxPDBOrder();
case "pdbx_new_asym_id":
return getPdbxNewAsymId();
case "pdbx_new_pdb_asym_id":
return getPdbxNewPdbAsymId();
case "pdbx_color_red":
return getPdbxColorRed();
case "pdbx_color_green":
return getPdbxColorGreen();
case "pdbx_color_blue":
return getPdbxColorBlue();
case "pdbx_after_begin_residue_no":
return getPdbxAfterBeginResidueNo();
case "pdbx_after_end_residue_no":
return getPdbxAfterEndResidueNo();
case "pdbx_before_begin_residue_no":
return getPdbxBeforeBeginResidueNo();
case "pdbx_before_end_residue_no":
return getPdbxBeforeEndResidueNo();
default:
return new DelegatingColumn(column);
}
}
/**
* This data item is a pointer to _struct_asym.id in the STRUCT_ASYM
* category.
* @return StrColumn
*/
public StrColumn getAsymId() {
return delegate.getColumn("asym_id", DelegatingStrColumn::new);
}
/**
* This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
* category.
* @return StrColumn
*/
public StrColumn getBiolId() {
return delegate.getColumn("biol_id", DelegatingStrColumn::new);
}
/**
* A description of special aspects of the symmetry generation of
* this portion of the biological structure.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* Describes the symmetry operation that should be applied to the
* atom set specified by _struct_biol_gen.asym_id to generate a
* portion of the biological structure.
* @return StrColumn
*/
public StrColumn getSymmetry() {
return delegate.getColumn("symmetry", DelegatingStrColumn::new);
}
/**
* This item expresses category _struct_biol_gen.symmetry
* on an X, Y and Z basis.
* @return StrColumn
*/
public StrColumn getPdbxFullSymmetryOperation() {
return delegate.getColumn("pdbx_full_symmetry_operation", DelegatingStrColumn::new);
}
/**
* An ordering index used to reproduce the presentation of
* chain order in the original PDB format data files.
* @return IntColumn
*/
public IntColumn getPdbxPDBOrder() {
return delegate.getColumn("pdbx_PDB_order", DelegatingIntColumn::new);
}
/**
* This category gives the NDB strand ids for the complete
* biomolecule after it is generated.
* @return StrColumn
*/
public StrColumn getPdbxNewAsymId() {
return delegate.getColumn("pdbx_new_asym_id", DelegatingStrColumn::new);
}
/**
* This data item is the PDB strand ID of the strand which will be
* generated.
* @return StrColumn
*/
public StrColumn getPdbxNewPdbAsymId() {
return delegate.getColumn("pdbx_new_pdb_asym_id", DelegatingStrColumn::new);
}
/**
* Gives rgb color code of this strand.
* @return FloatColumn
*/
public FloatColumn getPdbxColorRed() {
return delegate.getColumn("pdbx_color_red", DelegatingFloatColumn::new);
}
/**
* Gives rgb color code of this strand.
* @return FloatColumn
*/
public FloatColumn getPdbxColorGreen() {
return delegate.getColumn("pdbx_color_green", DelegatingFloatColumn::new);
}
/**
* Gives rgb color code of this strand.
* @return FloatColumn
*/
public FloatColumn getPdbxColorBlue() {
return delegate.getColumn("pdbx_color_blue", DelegatingFloatColumn::new);
}
/**
* The new residue number after generation of portions of
* the biomolecule.
* @return StrColumn
*/
public StrColumn getPdbxAfterBeginResidueNo() {
return delegate.getColumn("pdbx_after_begin_residue_no", DelegatingStrColumn::new);
}
/**
* The new residue number after generation of portions of
* the biomolecule.
* @return StrColumn
*/
public StrColumn getPdbxAfterEndResidueNo() {
return delegate.getColumn("pdbx_after_end_residue_no", DelegatingStrColumn::new);
}
/**
* The number of the first residue to which the symmetry
* operations have to be applied to generate a portion of
* the biomolecule.
* @return StrColumn
*/
public StrColumn getPdbxBeforeBeginResidueNo() {
return delegate.getColumn("pdbx_before_begin_residue_no", DelegatingStrColumn::new);
}
/**
* The number of the last residue to which the symmetry
* operations have to be applied to generate a portion of
* the biomolecule.
* @return StrColumn
*/
public StrColumn getPdbxBeforeEndResidueNo() {
return delegate.getColumn("pdbx_before_end_residue_no", DelegatingStrColumn::new);
}
}