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package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the STRUCT_CONN category record details about
* the connections between portions of the structure. These can be
* hydrogen bonds, salt bridges, disulfide bridges and so on.
*
* The STRUCT_CONN_TYPE records define the criteria used to
* identify these connections.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructConn extends DelegatingCategory {
public StructConn(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "conn_type_id":
return getConnTypeId();
case "details":
return getDetails();
case "id":
return getId();
case "ptnr1_label_alt_id":
return getPtnr1LabelAltId();
case "ptnr1_label_asym_id":
return getPtnr1LabelAsymId();
case "ptnr1_label_atom_id":
return getPtnr1LabelAtomId();
case "ptnr1_label_comp_id":
return getPtnr1LabelCompId();
case "ptnr1_label_seq_id":
return getPtnr1LabelSeqId();
case "ptnr1_auth_asym_id":
return getPtnr1AuthAsymId();
case "ptnr1_auth_atom_id":
return getPtnr1AuthAtomId();
case "ptnr1_auth_comp_id":
return getPtnr1AuthCompId();
case "ptnr1_auth_seq_id":
return getPtnr1AuthSeqId();
case "ptnr1_role":
return getPtnr1Role();
case "ptnr1_symmetry":
return getPtnr1Symmetry();
case "ptnr2_label_alt_id":
return getPtnr2LabelAltId();
case "ptnr2_label_asym_id":
return getPtnr2LabelAsymId();
case "ptnr2_label_atom_id":
return getPtnr2LabelAtomId();
case "ptnr2_label_comp_id":
return getPtnr2LabelCompId();
case "ptnr2_label_seq_id":
return getPtnr2LabelSeqId();
case "ptnr2_auth_asym_id":
return getPtnr2AuthAsymId();
case "ptnr2_auth_atom_id":
return getPtnr2AuthAtomId();
case "ptnr2_auth_comp_id":
return getPtnr2AuthCompId();
case "ptnr2_auth_seq_id":
return getPtnr2AuthSeqId();
case "ptnr2_role":
return getPtnr2Role();
case "ptnr2_symmetry":
return getPtnr2Symmetry();
case "pdbx_ptnr1_PDB_ins_code":
return getPdbxPtnr1PDBInsCode();
case "pdbx_ptnr1_auth_alt_id":
return getPdbxPtnr1AuthAltId();
case "pdbx_ptnr1_label_alt_id":
return getPdbxPtnr1LabelAltId();
case "pdbx_ptnr1_standard_comp_id":
return getPdbxPtnr1StandardCompId();
case "pdbx_ptnr2_PDB_ins_code":
return getPdbxPtnr2PDBInsCode();
case "pdbx_ptnr2_auth_alt_id":
return getPdbxPtnr2AuthAltId();
case "pdbx_ptnr2_label_alt_id":
return getPdbxPtnr2LabelAltId();
case "pdbx_ptnr3_auth_alt_id":
return getPdbxPtnr3AuthAltId();
case "pdbx_ptnr3_auth_asym_id":
return getPdbxPtnr3AuthAsymId();
case "pdbx_ptnr3_auth_atom_id":
return getPdbxPtnr3AuthAtomId();
case "pdbx_ptnr3_auth_comp_id":
return getPdbxPtnr3AuthCompId();
case "pdbx_ptnr3_PDB_ins_code":
return getPdbxPtnr3PDBInsCode();
case "pdbx_ptnr3_auth_seq_id":
return getPdbxPtnr3AuthSeqId();
case "pdbx_ptnr3_label_alt_id":
return getPdbxPtnr3LabelAltId();
case "pdbx_ptnr3_label_asym_id":
return getPdbxPtnr3LabelAsymId();
case "pdbx_ptnr3_label_atom_id":
return getPdbxPtnr3LabelAtomId();
case "pdbx_ptnr3_label_comp_id":
return getPdbxPtnr3LabelCompId();
case "pdbx_ptnr3_label_seq_id":
return getPdbxPtnr3LabelSeqId();
case "pdbx_PDB_id":
return getPdbxPDBId();
case "pdbx_dist_value":
return getPdbxDistValue();
case "pdbx_value_order":
return getPdbxValueOrder();
case "pdbx_leaving_atom_flag":
return getPdbxLeavingAtomFlag();
case "pdbx_ptnr1_mod_name":
return getPdbxPtnr1ModName();
case "pdbx_ptnr1_sugar_name":
return getPdbxPtnr1SugarName();
case "pdbx_ptnr1_replaced_atom":
return getPdbxPtnr1ReplacedAtom();
case "pdbx_ptnr3_auth_ins_code":
return getPdbxPtnr3AuthInsCode();
case "pdbx_ptnr1_atom_stereo_config":
return getPdbxPtnr1AtomStereoConfig();
case "pdbx_ptnr1_leaving_atom_id":
return getPdbxPtnr1LeavingAtomId();
case "pdbx_ptnr2_atom_stereo_config":
return getPdbxPtnr2AtomStereoConfig();
case "pdbx_ptnr2_leaving_atom_id":
return getPdbxPtnr2LeavingAtomId();
case "pdbx_role":
return getPdbxRole();
default:
return new DelegatingColumn(column);
}
}
/**
* This data item is a pointer to _struct_conn_type.id in the
* STRUCT_CONN_TYPE category.
* @return StrColumn
*/
public StrColumn getConnTypeId() {
return delegate.getColumn("conn_type_id", DelegatingStrColumn::new);
}
/**
* A description of special aspects of the connection.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The value of _struct_conn.id must uniquely identify a record in
* the STRUCT_CONN list.
*
* Note that this item need not be a number; it can be any unique
* identifier.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_sites_alt.id in the
* ATOM_SITES_ALT category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAltId() {
return delegate.getColumn("ptnr1_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAsymId() {
return delegate.getColumn("ptnr1_label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAtomId() {
return delegate.getColumn("ptnr1_label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelCompId() {
return delegate.getColumn("ptnr1_label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr1LabelSeqId() {
return delegate.getColumn("ptnr1_label_seq_id", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1AuthAsymId() {
return delegate.getColumn("ptnr1_auth_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1AuthAtomId() {
return delegate.getColumn("ptnr1_auth_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1AuthCompId() {
return delegate.getColumn("ptnr1_auth_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr1AuthSeqId() {
return delegate.getColumn("ptnr1_auth_seq_id", DelegatingIntColumn::new);
}
/**
* The chemical or structural role of the first partner in
* the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr1Role() {
return delegate.getColumn("ptnr1_role", DelegatingStrColumn::new);
}
/**
* Describes the symmetry operation that should be applied to the
* atom set specified by _struct_conn.ptnr1_label* to generate the
* first partner in the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr1Symmetry() {
return delegate.getColumn("ptnr1_symmetry", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_sites_alt.id in the
* ATOM_SITES_ALT category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAltId() {
return delegate.getColumn("ptnr2_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAsymId() {
return delegate.getColumn("ptnr2_label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAtomId() {
return delegate.getColumn("ptnr2_label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelCompId() {
return delegate.getColumn("ptnr2_label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr2LabelSeqId() {
return delegate.getColumn("ptnr2_label_seq_id", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2AuthAsymId() {
return delegate.getColumn("ptnr2_auth_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2AuthAtomId() {
return delegate.getColumn("ptnr2_auth_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2AuthCompId() {
return delegate.getColumn("ptnr2_auth_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr2AuthSeqId() {
return delegate.getColumn("ptnr2_auth_seq_id", DelegatingIntColumn::new);
}
/**
* The chemical or structural role of the second partner in
* the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr2Role() {
return delegate.getColumn("ptnr2_role", DelegatingStrColumn::new);
}
/**
* Describes the symmetry operation that should be applied to the
* atom set specified by _struct_conn.ptnr2_label* to generate the
* second partner in the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr2Symmetry() {
return delegate.getColumn("ptnr2_symmetry", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1PDBInsCode() {
return delegate.getColumn("pdbx_ptnr1_PDB_ins_code", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the
* structure connection. This data item is a pointer to
* _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1AuthAltId() {
return delegate.getColumn("pdbx_ptnr1_auth_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the
* structure connection. This data item is a pointer to
* _atom_site.label_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1LabelAltId() {
return delegate.getColumn("pdbx_ptnr1_label_alt_id", DelegatingStrColumn::new);
}
/**
* A placeholder for the standard residue name found in
* the MODRES record of a PDB file.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1StandardCompId() {
return delegate.getColumn("pdbx_ptnr1_standard_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr2PDBInsCode() {
return delegate.getColumn("pdbx_ptnr2_PDB_ins_code", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the
* structure connection. This data item is a pointer to
* _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr2AuthAltId() {
return delegate.getColumn("pdbx_ptnr2_auth_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the
* structure connection. This data item is a pointer to
* _atom_site.label_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr2LabelAltId() {
return delegate.getColumn("pdbx_ptnr2_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthAltId() {
return delegate.getColumn("pdbx_ptnr3_auth_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.auth_asym_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthAsymId() {
return delegate.getColumn("pdbx_ptnr3_auth_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.auth_atom_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthAtomId() {
return delegate.getColumn("pdbx_ptnr3_auth_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.auth_comp_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthCompId() {
return delegate.getColumn("pdbx_ptnr3_auth_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3PDBInsCode() {
return delegate.getColumn("pdbx_ptnr3_PDB_ins_code", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the
* structure connection. This data item is a pointer to
* _atom_site.auth_seq_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthSeqId() {
return delegate.getColumn("pdbx_ptnr3_auth_seq_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.label_alt_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3LabelAltId() {
return delegate.getColumn("pdbx_ptnr3_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.label_asym_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3LabelAsymId() {
return delegate.getColumn("pdbx_ptnr3_label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.label_atom_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3LabelAtomId() {
return delegate.getColumn("pdbx_ptnr3_label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.label_comp_id in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3LabelCompId() {
return delegate.getColumn("pdbx_ptnr3_label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the
* structure connection. This data item is a pointer to
* _atom_site.label_seq_id in the ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPdbxPtnr3LabelSeqId() {
return delegate.getColumn("pdbx_ptnr3_label_seq_id", DelegatingIntColumn::new);
}
/**
* A placeholder for the PDB id in the case the category
* is used to hold the information of the MODRES record of
* a PDB file.
* @return StrColumn
*/
public StrColumn getPdbxPDBId() {
return delegate.getColumn("pdbx_PDB_id", DelegatingStrColumn::new);
}
/**
* Distance value for this contact.
* @return FloatColumn
*/
public FloatColumn getPdbxDistValue() {
return delegate.getColumn("pdbx_dist_value", DelegatingFloatColumn::new);
}
/**
* The chemical bond order associated with the specified atoms in
* this contact.
* @return StrColumn
*/
public StrColumn getPdbxValueOrder() {
return delegate.getColumn("pdbx_value_order", DelegatingStrColumn::new);
}
/**
* This data item identifies if the linkage has displaced leaving atoms
* on both, one or none of the connected atoms forming the linkage.
* Leaving atoms are defined within their chemical defintions of each
* connected component.
* @return StrColumn
*/
public StrColumn getPdbxLeavingAtomFlag() {
return delegate.getColumn("pdbx_leaving_atom_flag", DelegatingStrColumn::new);
}
/**
* The abbreviation of the modifier group.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1ModName() {
return delegate.getColumn("pdbx_ptnr1_mod_name", DelegatingStrColumn::new);
}
/**
* The abbreviation of the sugar modifier in the case it is a
* conformer of deoxyribose or ribose.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1SugarName() {
return delegate.getColumn("pdbx_ptnr1_sugar_name", DelegatingStrColumn::new);
}
/**
* The name of the atom which got replaced by the modifier.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1ReplacedAtom() {
return delegate.getColumn("pdbx_ptnr1_replaced_atom", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 3 of the
* structure connection. This data item is a pointer to
* _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPdbxPtnr3AuthInsCode() {
return delegate.getColumn("pdbx_ptnr3_auth_ins_code", DelegatingStrColumn::new);
}
/**
* The chiral configuration of the first atom making the linkage.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1AtomStereoConfig() {
return delegate.getColumn("pdbx_ptnr1_atom_stereo_config", DelegatingStrColumn::new);
}
/**
* The leaving atom that is removed from first atom making the linkage.
* @return StrColumn
*/
public StrColumn getPdbxPtnr1LeavingAtomId() {
return delegate.getColumn("pdbx_ptnr1_leaving_atom_id", DelegatingStrColumn::new);
}
/**
* The chiral configuration of the second atom making the linkage.
* @return StrColumn
*/
public StrColumn getPdbxPtnr2AtomStereoConfig() {
return delegate.getColumn("pdbx_ptnr2_atom_stereo_config", DelegatingStrColumn::new);
}
/**
* The leaving atom that is removed from second atom making the linkage.
* @return StrColumn
*/
public StrColumn getPdbxPtnr2LeavingAtomId() {
return delegate.getColumn("pdbx_ptnr2_leaving_atom_id", DelegatingStrColumn::new);
}
/**
* The chemical or structural role of the interaction
* @return StrColumn
*/
public StrColumn getPdbxRole() {
return delegate.getColumn("pdbx_role", DelegatingStrColumn::new);
}
}
