org.rcsb.cif.schema.mm.StructRefSeqDif Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the STRUCT_REF_SEQ_DIF category provide a
* mechanism for indicating and annotating point differences
* between the sequence of the entity or biological unit described
* in the data block and the sequence of the referenced database
* entry.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructRefSeqDif extends DelegatingCategory {
public StructRefSeqDif(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "align_id":
return getAlignId();
case "db_mon_id":
return getDbMonId();
case "details":
return getDetails();
case "mon_id":
return getMonId();
case "seq_num":
return getSeqNum();
case "pdbx_pdb_id_code":
return getPdbxPdbIdCode();
case "pdbx_pdb_strand_id":
return getPdbxPdbStrandId();
case "pdbx_pdb_ins_code":
return getPdbxPdbInsCode();
case "pdbx_auth_seq_num":
return getPdbxAuthSeqNum();
case "pdbx_seq_db_name":
return getPdbxSeqDbName();
case "pdbx_seq_db_accession_code":
return getPdbxSeqDbAccessionCode();
case "pdbx_seq_db_seq_num":
return getPdbxSeqDbSeqNum();
case "pdbx_ordinal":
return getPdbxOrdinal();
default:
return new DelegatingColumn(column);
}
}
/**
* This data item is a pointer to _struct_ref_seq.align_id in
* the STRUCT_REF_SEQ category.
* @return StrColumn
*/
public StrColumn getAlignId() {
return delegate.getColumn("align_id", DelegatingStrColumn::new);
}
/**
* The monomer type found at this position in the referenced
* database entry.
*
* This data item is a pointer to _chem_comp.id in the CHEM_COMP
* category.
* @return StrColumn
*/
public StrColumn getDbMonId() {
return delegate.getColumn("db_mon_id", DelegatingStrColumn::new);
}
/**
* A description of special aspects of the point differences
* between the sequence of the entity or biological unit described
* in the data block and that in the referenced database entry.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The monomer type found at this position in the sequence of
* the entity or biological unit described in this data block.
*
* This data item is a pointer to _chem_comp.id in the CHEM_COMP
* category.
* @return StrColumn
*/
public StrColumn getMonId() {
return delegate.getColumn("mon_id", DelegatingStrColumn::new);
}
/**
* This data item is a pointer to _entity_poly_seq.num in the
* ENTITY_POLY_SEQ category.
* @return IntColumn
*/
public IntColumn getSeqNum() {
return delegate.getColumn("seq_num", DelegatingIntColumn::new);
}
/**
* The PDB ID code.
* @return StrColumn
*/
public StrColumn getPdbxPdbIdCode() {
return delegate.getColumn("pdbx_pdb_id_code", DelegatingStrColumn::new);
}
/**
* PDB strand/chain id.
* @return StrColumn
*/
public StrColumn getPdbxPdbStrandId() {
return delegate.getColumn("pdbx_pdb_strand_id", DelegatingStrColumn::new);
}
/**
* Insertion code in PDB sequence
* @return StrColumn
*/
public StrColumn getPdbxPdbInsCode() {
return delegate.getColumn("pdbx_pdb_ins_code", DelegatingStrColumn::new);
}
/**
* The PDB sequence residue number.
* @return StrColumn
*/
public StrColumn getPdbxAuthSeqNum() {
return delegate.getColumn("pdbx_auth_seq_num", DelegatingStrColumn::new);
}
/**
* Sequence database name.
* @return StrColumn
*/
public StrColumn getPdbxSeqDbName() {
return delegate.getColumn("pdbx_seq_db_name", DelegatingStrColumn::new);
}
/**
* Sequence database accession number.
* @return StrColumn
*/
public StrColumn getPdbxSeqDbAccessionCode() {
return delegate.getColumn("pdbx_seq_db_accession_code", DelegatingStrColumn::new);
}
/**
* Sequence database sequence number.
* @return StrColumn
*/
public StrColumn getPdbxSeqDbSeqNum() {
return delegate.getColumn("pdbx_seq_db_seq_num", DelegatingStrColumn::new);
}
/**
* A synthetic integer primary key for this category.
* @return IntColumn
*/
public IntColumn getPdbxOrdinal() {
return delegate.getColumn("pdbx_ordinal", DelegatingIntColumn::new);
}
}