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package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the ATOM_SITE_ANISOTROP category record details
* about anisotropic displacement parameters.
* If the ATOM_SITE_ANISOTROP category is used for storing these
* data, the corresponding ATOM_SITE data items are not used.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class AtomSiteAnisotrop extends DelegatingCategory {
public AtomSiteAnisotrop(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "B[1][1]":
return getB11();
case "B[1][1]_esd":
return getB11Esd();
case "B[1][2]":
return getB12();
case "B[1][2]_esd":
return getB12Esd();
case "B[1][3]":
return getB13();
case "B[1][3]_esd":
return getB13Esd();
case "B[2][2]":
return getB22();
case "B[2][2]_esd":
return getB22Esd();
case "B[2][3]":
return getB23();
case "B[2][3]_esd":
return getB23Esd();
case "B[3][3]":
return getB33();
case "B[3][3]_esd":
return getB33Esd();
case "ratio":
return getRatio();
case "id":
return getId();
case "type_symbol":
return getTypeSymbol();
case "U[1][1]":
return getU11();
case "U[1][1]_esd":
return getU11Esd();
case "U[1][2]":
return getU12();
case "U[1][2]_esd":
return getU12Esd();
case "U[1][3]":
return getU13();
case "U[1][3]_esd":
return getU13Esd();
case "U[2][2]":
return getU22();
case "U[2][2]_esd":
return getU22Esd();
case "U[2][3]":
return getU23();
case "U[2][3]_esd":
return getU23Esd();
case "U[3][3]":
return getU33();
case "U[3][3]_esd":
return getU33Esd();
case "pdbx_auth_seq_id":
return getPdbxAuthSeqId();
case "pdbx_auth_alt_id":
return getPdbxAuthAltId();
case "pdbx_auth_asym_id":
return getPdbxAuthAsymId();
case "pdbx_auth_atom_id":
return getPdbxAuthAtomId();
case "pdbx_auth_comp_id":
return getPdbxAuthCompId();
case "pdbx_label_seq_id":
return getPdbxLabelSeqId();
case "pdbx_label_alt_id":
return getPdbxLabelAltId();
case "pdbx_label_asym_id":
return getPdbxLabelAsymId();
case "pdbx_label_atom_id":
return getPdbxLabelAtomId();
case "pdbx_label_comp_id":
return getPdbxLabelCompId();
case "pdbx_PDB_ins_code":
return getPdbxPDBInsCode();
case "pdbx_PDB_model_num":
return getPdbxPDBModelNum();
case "pdbx_not_in_asym":
return getPdbxNotInAsym();
case "pdbx_PDB_residue_no":
return getPdbxPDBResidueNo();
case "pdbx_PDB_residue_name":
return getPdbxPDBResidueName();
case "pdbx_PDB_strand_id":
return getPdbxPDBStrandId();
case "pdbx_PDB_atom_name":
return getPdbxPDBAtomName();
case "pdbx_auth_atom_name":
return getPdbxAuthAtomName();
case "pdbx_label_ins_code":
return getPdbxLabelInsCode();
default:
return new DelegatingColumn(column);
}
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB11() {
return delegate.getColumn("B[1][1]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB11Esd() {
return delegate.getColumn("B[1][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB12() {
return delegate.getColumn("B[1][2]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB12Esd() {
return delegate.getColumn("B[1][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB13() {
return delegate.getColumn("B[1][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB13Esd() {
return delegate.getColumn("B[1][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB22() {
return delegate.getColumn("B[2][2]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB22Esd() {
return delegate.getColumn("B[2][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB23() {
return delegate.getColumn("B[2][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB23Esd() {
return delegate.getColumn("B[2][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the anisotropic atomic displacement
* matrix B, which appears in the structure-factor term as:
*
* T = exp{-1/4 sum~i~[sum~j~(B^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
*
* The IUCr Commission on Nomenclature recommends against the use
* of B for reporting atomic displacement parameters. U, being
* directly proportional to B, is preferred.
* @return FloatColumn
*/
public FloatColumn getB33() {
return delegate.getColumn("B[3][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.B.
* @return FloatColumn
*/
public FloatColumn getB33Esd() {
return delegate.getColumn("B[3][3]_esd", DelegatingFloatColumn::new);
}
/**
* Ratio of the maximum to minimum principal axes of
* displacement (thermal) ellipsoids.
* @return FloatColumn
*/
public FloatColumn getRatio() {
return delegate.getColumn("ratio", DelegatingFloatColumn::new);
}
/**
* This data item is a pointer to _atom_site.id in the ATOM_SITE
* category.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* This data item is a pointer to _atom_type.symbol in the
* ATOM_TYPE category.
* @return StrColumn
*/
public StrColumn getTypeSymbol() {
return delegate.getColumn("type_symbol", DelegatingStrColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU11() {
return delegate.getColumn("U[1][1]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU11Esd() {
return delegate.getColumn("U[1][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU12() {
return delegate.getColumn("U[1][2]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU12Esd() {
return delegate.getColumn("U[1][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU13() {
return delegate.getColumn("U[1][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU13Esd() {
return delegate.getColumn("U[1][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU22() {
return delegate.getColumn("U[2][2]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU22Esd() {
return delegate.getColumn("U[2][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU23() {
return delegate.getColumn("U[2][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU23Esd() {
return delegate.getColumn("U[2][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the standard anisotropic atomic
* displacement matrix U, which appears in the structure-factor
* term as:
*
* T = exp{-2 pi^2^ sum~i~[sum~j~(U^ij^ h~i~ h~j~ a*~i~ a*~j~)]}
*
* h = the Miller indices
* a* = the reciprocal space cell lengths
*
* These matrix elements may appear with atomic coordinates
* in the ATOM_SITE category, or they may appear in the separate
* ATOM_SITE_ANISOTROP category, but they may not appear in both
* places. Similarly, anisotropic displacements may appear as
* either B's or U's, but not as both.
*
* The unique elements of the real symmetric matrix are
* entered by row.
* @return FloatColumn
*/
public FloatColumn getU33() {
return delegate.getColumn("U[3][3]", DelegatingFloatColumn::new);
}
/**
* The standard uncertainty (estimated standard deviation)
* of _atom_site_anisotrop.U.
* @return FloatColumn
*/
public FloatColumn getU33Esd() {
return delegate.getColumn("U[3][3]_esd", DelegatingFloatColumn::new);
}
/**
* Pointer to _atom_site.auth_seq_id
* @return StrColumn
*/
public StrColumn getPdbxAuthSeqId() {
return delegate.getColumn("pdbx_auth_seq_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.pdbx_auth_alt_id.
* @return StrColumn
*/
public StrColumn getPdbxAuthAltId() {
return delegate.getColumn("pdbx_auth_alt_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.auth_asym_id
* @return StrColumn
*/
public StrColumn getPdbxAuthAsymId() {
return delegate.getColumn("pdbx_auth_asym_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.auth_atom_id
* @return StrColumn
*/
public StrColumn getPdbxAuthAtomId() {
return delegate.getColumn("pdbx_auth_atom_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.auth_comp_id
* @return StrColumn
*/
public StrColumn getPdbxAuthCompId() {
return delegate.getColumn("pdbx_auth_comp_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.label_seq_id
* @return IntColumn
*/
public IntColumn getPdbxLabelSeqId() {
return delegate.getColumn("pdbx_label_seq_id", DelegatingIntColumn::new);
}
/**
* Pointer to _atom_site.label_alt_id.
* @return StrColumn
*/
public StrColumn getPdbxLabelAltId() {
return delegate.getColumn("pdbx_label_alt_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.label_asym_id
* @return StrColumn
*/
public StrColumn getPdbxLabelAsymId() {
return delegate.getColumn("pdbx_label_asym_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.label_atom_id
* @return StrColumn
*/
public StrColumn getPdbxLabelAtomId() {
return delegate.getColumn("pdbx_label_atom_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.label_comp_id
* @return StrColumn
*/
public StrColumn getPdbxLabelCompId() {
return delegate.getColumn("pdbx_label_comp_id", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.pdbx_PDB_ins_code
* @return StrColumn
*/
public StrColumn getPdbxPDBInsCode() {
return delegate.getColumn("pdbx_PDB_ins_code", DelegatingStrColumn::new);
}
/**
* Pointer to _atom_site.pdbx_PDB_model_num
* @return IntColumn
*/
public IntColumn getPdbxPDBModelNum() {
return delegate.getColumn("pdbx_PDB_model_num", DelegatingIntColumn::new);
}
/**
* Will identify with a 'Y' that this strand got generated.
* @return StrColumn
*/
public StrColumn getPdbxNotInAsym() {
return delegate.getColumn("pdbx_not_in_asym", DelegatingStrColumn::new);
}
/**
* PDB residue number.
* @return StrColumn
*/
public StrColumn getPdbxPDBResidueNo() {
return delegate.getColumn("pdbx_PDB_residue_no", DelegatingStrColumn::new);
}
/**
* PDB residue name.
* @return StrColumn
*/
public StrColumn getPdbxPDBResidueName() {
return delegate.getColumn("pdbx_PDB_residue_name", DelegatingStrColumn::new);
}
/**
* PDB strand id.
* @return StrColumn
*/
public StrColumn getPdbxPDBStrandId() {
return delegate.getColumn("pdbx_PDB_strand_id", DelegatingStrColumn::new);
}
/**
* PDB atom name.
* @return StrColumn
*/
public StrColumn getPdbxPDBAtomName() {
return delegate.getColumn("pdbx_PDB_atom_name", DelegatingStrColumn::new);
}
/**
* Author's atom name.
* @return StrColumn
*/
public StrColumn getPdbxAuthAtomName() {
return delegate.getColumn("pdbx_auth_atom_name", DelegatingStrColumn::new);
}
/**
* NDB INSERTION CODE
* @return StrColumn
*/
public StrColumn getPdbxLabelInsCode() {
return delegate.getColumn("pdbx_label_ins_code", DelegatingStrColumn::new);
}
}
