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package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the ATOM_TYPE category record details about the
* properties of the atoms that occupy the atom sites, such as the
* atomic scattering factors.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class AtomType extends DelegatingCategory {
public AtomType(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "analytical_mass_percent":
return getAnalyticalMassPercent();
case "description":
return getDescription();
case "number_in_cell":
return getNumberInCell();
case "oxidation_number":
return getOxidationNumber();
case "radius_bond":
return getRadiusBond();
case "radius_contact":
return getRadiusContact();
case "scat_Cromer_Mann_a1":
return getScatCromerMannA1();
case "scat_Cromer_Mann_a2":
return getScatCromerMannA2();
case "scat_Cromer_Mann_a3":
return getScatCromerMannA3();
case "scat_Cromer_Mann_a4":
return getScatCromerMannA4();
case "scat_Cromer_Mann_b1":
return getScatCromerMannB1();
case "scat_Cromer_Mann_b2":
return getScatCromerMannB2();
case "scat_Cromer_Mann_b3":
return getScatCromerMannB3();
case "scat_Cromer_Mann_b4":
return getScatCromerMannB4();
case "scat_Cromer_Mann_c":
return getScatCromerMannC();
case "scat_dispersion_imag":
return getScatDispersionImag();
case "scat_dispersion_real":
return getScatDispersionReal();
case "scat_length_neutron":
return getScatLengthNeutron();
case "scat_source":
return getScatSource();
case "scat_versus_stol_list":
return getScatVersusStolList();
case "symbol":
return getSymbol();
case "scat_dispersion_source":
return getScatDispersionSource();
case "pdbx_scat_Cromer_Mann_a5":
return getPdbxScatCromerMannA5();
case "pdbx_scat_Cromer_Mann_b5":
return getPdbxScatCromerMannB5();
case "pdbx_scat_Cromer_Mann_a6":
return getPdbxScatCromerMannA6();
case "pdbx_scat_Cromer_Mann_b6":
return getPdbxScatCromerMannB6();
case "pdbx_scat_Z":
return getPdbxScatZ();
case "pdbx_N_electrons":
return getPdbxNElectrons();
default:
return new DelegatingColumn(column);
}
}
/**
* Mass percentage of this atom type derived from chemical analysis.
* @return FloatColumn
*/
public FloatColumn getAnalyticalMassPercent() {
return delegate.getColumn("analytical_mass_percent", DelegatingFloatColumn::new);
}
/**
* A description of the atom(s) designated by this atom type. In
* most cases, this is the element name and oxidation state of
* a single atom species. For disordered or nonstoichiometric
* structures it will describe a combination of atom species.
* @return StrColumn
*/
public StrColumn getDescription() {
return delegate.getColumn("description", DelegatingStrColumn::new);
}
/**
* Total number of atoms of this atom type in the unit cell.
* @return IntColumn
*/
public IntColumn getNumberInCell() {
return delegate.getColumn("number_in_cell", DelegatingIntColumn::new);
}
/**
* Formal oxidation state of this atom type in the structure.
* @return IntColumn
*/
public IntColumn getOxidationNumber() {
return delegate.getColumn("oxidation_number", DelegatingIntColumn::new);
}
/**
* The effective intramolecular bonding radius in angstroms
* of this atom type.
* @return FloatColumn
*/
public FloatColumn getRadiusBond() {
return delegate.getColumn("radius_bond", DelegatingFloatColumn::new);
}
/**
* The effective intermolecular bonding radius in angstroms
* of this atom type.
* @return FloatColumn
*/
public FloatColumn getRadiusContact() {
return delegate.getColumn("radius_contact", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient a1 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannA1() {
return delegate.getColumn("scat_Cromer_Mann_a1", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient a2 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannA2() {
return delegate.getColumn("scat_Cromer_Mann_a2", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient a3 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannA3() {
return delegate.getColumn("scat_Cromer_Mann_a3", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient a4 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannA4() {
return delegate.getColumn("scat_Cromer_Mann_a4", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient b1 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannB1() {
return delegate.getColumn("scat_Cromer_Mann_b1", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient b2 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannB2() {
return delegate.getColumn("scat_Cromer_Mann_b2", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient b3 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannB3() {
return delegate.getColumn("scat_Cromer_Mann_b3", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient b4 used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannB4() {
return delegate.getColumn("scat_Cromer_Mann_b4", DelegatingFloatColumn::new);
}
/**
* The Cromer-Mann scattering-factor coefficient c used to
* calculate the scattering factors for this atom type.
*
* Ref: International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getScatCromerMannC() {
return delegate.getColumn("scat_Cromer_Mann_c", DelegatingFloatColumn::new);
}
/**
* The imaginary component of the anomalous-dispersion
* scattering factor, f'', in electrons for this atom type and
* the radiation identified by _diffrn_radiation_wavelength.id.
* @return FloatColumn
*/
public FloatColumn getScatDispersionImag() {
return delegate.getColumn("scat_dispersion_imag", DelegatingFloatColumn::new);
}
/**
* The real component of the anomalous-dispersion
* scattering factor, f', in electrons for this atom type and
* the radiation identified by _diffrn_radiation_wavelength.id.
* @return FloatColumn
*/
public FloatColumn getScatDispersionReal() {
return delegate.getColumn("scat_dispersion_real", DelegatingFloatColumn::new);
}
/**
* The bound coherent scattering length in femtometres for the
* atom type at the isotopic composition used for the diffraction
* experiment.
* @return StrColumn
*/
public StrColumn getScatLengthNeutron() {
return delegate.getColumn("scat_length_neutron", DelegatingStrColumn::new);
}
/**
* Reference to the source of the scattering factors or scattering
* lengths used for this atom type.
* @return StrColumn
*/
public StrColumn getScatSource() {
return delegate.getColumn("scat_source", DelegatingStrColumn::new);
}
/**
* A table of scattering factors as a function of sin theta over
* lambda. This table should be well commented to indicate the
* items present. Regularly formatted lists are strongly
* recommended.
* @return StrColumn
*/
public StrColumn getScatVersusStolList() {
return delegate.getColumn("scat_versus_stol_list", DelegatingStrColumn::new);
}
/**
* The code used to identify the atom species (singular or plural)
* representing this atom type. Normally this code is the element
* symbol. The code may be composed of any character except
* an underscore with the additional proviso that digits designate
* an oxidation state and must be followed by a + or - character.
* @return StrColumn
*/
public StrColumn getSymbol() {
return delegate.getColumn("symbol", DelegatingStrColumn::new);
}
/**
* Reference to the source of the real and imaginary dispersion
* corrections for scattering factors used for this atom type.
* @return StrColumn
*/
public StrColumn getScatDispersionSource() {
return delegate.getColumn("scat_dispersion_source", DelegatingStrColumn::new);
}
/**
* Scattering-factor coefficient a5, used to calculate electron
* elastic atomic scattering factors for the defined atom type.
*
* Electron Elastic Scattering Factors Ref:
* International Tables for X-ray Crystallography (2006).
* Vol. C, Table 4.3.2.2, pp. 282-283.
*
* Cromer_Mann equation Ref:
* International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getPdbxScatCromerMannA5() {
return delegate.getColumn("pdbx_scat_Cromer_Mann_a5", DelegatingFloatColumn::new);
}
/**
* Scattering-factor coefficient b5, used to calculate electron
* elastic atomic scattering factors for the defined atom type.
*
* Electron Elastic Scattering Factors Ref:
* International Tables for X-ray Crystallography (2006).
* Vol. C, Table 4.3.2.2, pp. 282-283.
*
* Cromer_Mann equation Ref:
* International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getPdbxScatCromerMannB5() {
return delegate.getColumn("pdbx_scat_Cromer_Mann_b5", DelegatingFloatColumn::new);
}
/**
* Scattering-factor coefficient a6, used to calculate electron
* elastic atomic scattering factors for the defined atom type.
*
* Electron Elastic Scattering Factors Ref:
* International Tables for X-ray Crystallography (2006).
* Vol. C, Table 4.3.2.2, pp. 282-283.
*
* Cromer_Mann equation Ref:
* International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getPdbxScatCromerMannA6() {
return delegate.getColumn("pdbx_scat_Cromer_Mann_a6", DelegatingFloatColumn::new);
}
/**
* Scattering-factor coefficient b6, used to calculate electron
* elastic atomic scattering factors for the defined atom type.
*
* Electron Elastic Scattering Factors Ref:
* International Tables for X-ray Crystallography (2006).
* Vol. C, Table 4.3.2.2, pp. 282-283.
*
* Cromer_Mann equation Ref:
* International Tables for X-ray Crystallography (1974).
* Vol. IV, Table 2.2B
* or: International Tables for Crystallography (2004). Vol. C,
* Tables 6.1.1.4 and 6.1.1.5.
* @return FloatColumn
*/
public FloatColumn getPdbxScatCromerMannB6() {
return delegate.getColumn("pdbx_scat_Cromer_Mann_b6", DelegatingFloatColumn::new);
}
/**
* Atomic number of atom in scattering amplitude.
* @return IntColumn
*/
public IntColumn getPdbxScatZ() {
return delegate.getColumn("pdbx_scat_Z", DelegatingIntColumn::new);
}
/**
* Number of electrons in atom used in scattering factor
* @return IntColumn
*/
public IntColumn getPdbxNElectrons() {
return delegate.getColumn("pdbx_N_electrons", DelegatingIntColumn::new);
}
}
