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package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the ENTITY_SRC_NAT category record details of
* the source from which the entity was obtained in cases
* where the entity was isolated directly from a natural tissue.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class EntitySrcNat extends DelegatingCategory {
public EntitySrcNat(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "common_name":
return getCommonName();
case "details":
return getDetails();
case "entity_id":
return getEntityId();
case "genus":
return getGenus();
case "species":
return getSpecies();
case "strain":
return getStrain();
case "tissue":
return getTissue();
case "tissue_fraction":
return getTissueFraction();
case "pdbx_organism_scientific":
return getPdbxOrganismScientific();
case "pdbx_secretion":
return getPdbxSecretion();
case "pdbx_fragment":
return getPdbxFragment();
case "pdbx_variant":
return getPdbxVariant();
case "pdbx_cell_line":
return getPdbxCellLine();
case "pdbx_atcc":
return getPdbxAtcc();
case "pdbx_cellular_location":
return getPdbxCellularLocation();
case "pdbx_organ":
return getPdbxOrgan();
case "pdbx_organelle":
return getPdbxOrganelle();
case "pdbx_cell":
return getPdbxCell();
case "pdbx_plasmid_name":
return getPdbxPlasmidName();
case "pdbx_plasmid_details":
return getPdbxPlasmidDetails();
case "pdbx_ncbi_taxonomy_id":
return getPdbxNcbiTaxonomyId();
case "pdbx_src_id":
return getPdbxSrcId();
case "pdbx_alt_source_flag":
return getPdbxAltSourceFlag();
case "pdbx_beg_seq_num":
return getPdbxBegSeqNum();
case "pdbx_end_seq_num":
return getPdbxEndSeqNum();
case "pdbx_culture_collection":
return getPdbxCultureCollection();
default:
return new DelegatingColumn(column);
}
}
/**
* The common name of the organism from which the entity
* was isolated.
* @return StrColumn
*/
public StrColumn getCommonName() {
return delegate.getColumn("common_name", DelegatingStrColumn::new);
}
/**
* A description of special aspects of the organism from which the
* entity was isolated.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* This data item is a pointer to _entity.id in the ENTITY category.
* @return StrColumn
*/
public StrColumn getEntityId() {
return delegate.getColumn("entity_id", DelegatingStrColumn::new);
}
/**
* The genus of the organism from which the entity was isolated.
* @return StrColumn
*/
public StrColumn getGenus() {
return delegate.getColumn("genus", DelegatingStrColumn::new);
}
/**
* The species of the organism from which the entity was isolated.
* @return StrColumn
*/
public StrColumn getSpecies() {
return delegate.getColumn("species", DelegatingStrColumn::new);
}
/**
* The strain of the organism from which the entity was isolated.
* @return StrColumn
*/
public StrColumn getStrain() {
return delegate.getColumn("strain", DelegatingStrColumn::new);
}
/**
* The tissue of the organism from which the entity was isolated.
* @return StrColumn
*/
public StrColumn getTissue() {
return delegate.getColumn("tissue", DelegatingStrColumn::new);
}
/**
* The subcellular fraction of the tissue of the organism from
* which the entity was isolated.
* @return StrColumn
*/
public StrColumn getTissueFraction() {
return delegate.getColumn("tissue_fraction", DelegatingStrColumn::new);
}
/**
* Scientific name of the organism of the natural source.
* @return StrColumn
*/
public StrColumn getPdbxOrganismScientific() {
return delegate.getColumn("pdbx_organism_scientific", DelegatingStrColumn::new);
}
/**
* Identifies the secretion from which the molecule was isolated.
* @return StrColumn
*/
public StrColumn getPdbxSecretion() {
return delegate.getColumn("pdbx_secretion", DelegatingStrColumn::new);
}
/**
* A domain or fragment of the molecule.
* @return StrColumn
*/
public StrColumn getPdbxFragment() {
return delegate.getColumn("pdbx_fragment", DelegatingStrColumn::new);
}
/**
* Identifies the variant.
* @return StrColumn
*/
public StrColumn getPdbxVariant() {
return delegate.getColumn("pdbx_variant", DelegatingStrColumn::new);
}
/**
* The specific line of cells.
* @return StrColumn
*/
public StrColumn getPdbxCellLine() {
return delegate.getColumn("pdbx_cell_line", DelegatingStrColumn::new);
}
/**
* Americal Tissue Culture Collection number.
* @return StrColumn
*/
public StrColumn getPdbxAtcc() {
return delegate.getColumn("pdbx_atcc", DelegatingStrColumn::new);
}
/**
* Identifies the location inside (or outside) the cell.
* @return StrColumn
*/
public StrColumn getPdbxCellularLocation() {
return delegate.getColumn("pdbx_cellular_location", DelegatingStrColumn::new);
}
/**
* Organized group of tissues that carries on a specialized function.
* @return StrColumn
*/
public StrColumn getPdbxOrgan() {
return delegate.getColumn("pdbx_organ", DelegatingStrColumn::new);
}
/**
* Organized structure within cell.
* @return StrColumn
*/
public StrColumn getPdbxOrganelle() {
return delegate.getColumn("pdbx_organelle", DelegatingStrColumn::new);
}
/**
* A particular cell type.
* @return StrColumn
*/
public StrColumn getPdbxCell() {
return delegate.getColumn("pdbx_cell", DelegatingStrColumn::new);
}
/**
* The plasmid containing the gene.
* @return StrColumn
*/
public StrColumn getPdbxPlasmidName() {
return delegate.getColumn("pdbx_plasmid_name", DelegatingStrColumn::new);
}
/**
* Details about the plasmid.
* @return StrColumn
*/
public StrColumn getPdbxPlasmidDetails() {
return delegate.getColumn("pdbx_plasmid_details", DelegatingStrColumn::new);
}
/**
* NCBI Taxonomy identifier for the source organism.
*
* Reference:
*
* Wheeler DL, Chappey C, Lash AE, Leipe DD, Madden TL, Schuler GD,
* Tatusova TA, Rapp BA (2000). Database resources of the National
* Center for Biotechnology Information. Nucleic Acids Res 2000 Jan
* 1;28(1):10-4
*
* Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Rapp BA,
* Wheeler DL (2000). GenBank. Nucleic Acids Res 2000 Jan 1;28(1):15-18.
* @return StrColumn
*/
public StrColumn getPdbxNcbiTaxonomyId() {
return delegate.getColumn("pdbx_ncbi_taxonomy_id", DelegatingStrColumn::new);
}
/**
* This data item is an ordinal identifier for entity_src_nat data records.
* @return IntColumn
*/
public IntColumn getPdbxSrcId() {
return delegate.getColumn("pdbx_src_id", DelegatingIntColumn::new);
}
/**
* This data item identifies cases in which an alternative source
* modeled.
* @return StrColumn
*/
public StrColumn getPdbxAltSourceFlag() {
return delegate.getColumn("pdbx_alt_source_flag", DelegatingStrColumn::new);
}
/**
* The beginning polymer sequence position for the polymer section corresponding
* to this source.
*
* A reference to the sequence position in the entity_poly category.
* @return IntColumn
*/
public IntColumn getPdbxBegSeqNum() {
return delegate.getColumn("pdbx_beg_seq_num", DelegatingIntColumn::new);
}
/**
* The ending polymer sequence position for the polymer section corresponding
* to this source.
*
* A reference to the sequence position in the entity_poly category.
* @return IntColumn
*/
public IntColumn getPdbxEndSeqNum() {
return delegate.getColumn("pdbx_end_seq_num", DelegatingIntColumn::new);
}
/**
* Culture Collection identifier.
* @return StrColumn
*/
public StrColumn getPdbxCultureCollection() {
return delegate.getColumn("pdbx_culture_collection", DelegatingStrColumn::new);
}
}
