org.rcsb.cif.schema.mm.MaTemplateCoord Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the MA_TEMPLATE_COORD category records the coordinates
* for customized structural templates used in model building. These are
* provided by the user and not referenced from an existing database.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class MaTemplateCoord extends DelegatingCategory {
public MaTemplateCoord(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "ordinal_id":
return getOrdinalId();
case "template_id":
return getTemplateId();
case "group_PDB":
return getGroupPDB();
case "type_symbol":
return getTypeSymbol();
case "label_entity_id":
return getLabelEntityId();
case "label_atom_id":
return getLabelAtomId();
case "label_comp_id":
return getLabelCompId();
case "label_seq_id":
return getLabelSeqId();
case "label_asym_id":
return getLabelAsymId();
case "auth_seq_id":
return getAuthSeqId();
case "auth_atom_id":
return getAuthAtomId();
case "auth_comp_id":
return getAuthCompId();
case "auth_asym_id":
return getAuthAsymId();
case "Cartn_x":
return getCartnX();
case "Cartn_y":
return getCartnY();
case "Cartn_z":
return getCartnZ();
case "occupancy":
return getOccupancy();
case "B_iso_or_equiv":
return getBIsoOrEquiv();
case "formal_charge":
return getFormalCharge();
case "pdb_model_num":
return getPdbModelNum();
default:
return new DelegatingColumn(column);
}
}
/**
* A unique identifier for this coordinate position.
* @return IntColumn
*/
public IntColumn getOrdinalId() {
return delegate.getColumn("ordinal_id", DelegatingIntColumn::new);
}
/**
* The identifier for the customized template structure.
* This data item is a pointer to _ma_template_customized.template_id
* in the MA_TEMPLATE_CUSTOMIZED category.
* @return IntColumn
*/
public IntColumn getTemplateId() {
return delegate.getColumn("template_id", DelegatingIntColumn::new);
}
/**
* The group of atoms to which the atom site in the starting model belongs. This data
* item is provided for compatibility with the original Protein Data Bank format,
* and only for that purpose.
* @return StrColumn
*/
public StrColumn getGroupPDB() {
return delegate.getColumn("group_PDB", DelegatingStrColumn::new);
}
/**
* The atom type symbol(element symbol) corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getTypeSymbol() {
return delegate.getColumn("type_symbol", DelegatingStrColumn::new);
}
/**
* The entity identifier corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getLabelEntityId() {
return delegate.getColumn("label_entity_id", DelegatingStrColumn::new);
}
/**
* The atom identifier/name corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getLabelAtomId() {
return delegate.getColumn("label_atom_id", DelegatingStrColumn::new);
}
/**
* The component identifier corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getLabelCompId() {
return delegate.getColumn("label_comp_id", DelegatingStrColumn::new);
}
/**
* The sequence index corresponding this to coordinate position.
* @return IntColumn
*/
public IntColumn getLabelSeqId() {
return delegate.getColumn("label_seq_id", DelegatingIntColumn::new);
}
/**
* The asym/strand id corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getLabelAsymId() {
return delegate.getColumn("label_asym_id", DelegatingStrColumn::new);
}
/**
* The author provided sequence index corresponding this to coordinate position.
* @return IntColumn
*/
public IntColumn getAuthSeqId() {
return delegate.getColumn("auth_seq_id", DelegatingIntColumn::new);
}
/**
* The author provided atom identifier/name corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getAuthAtomId() {
return delegate.getColumn("auth_atom_id", DelegatingStrColumn::new);
}
/**
* The author provided component identifier corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getAuthCompId() {
return delegate.getColumn("auth_comp_id", DelegatingStrColumn::new);
}
/**
* The author provided asym/strand id corresponding to this coordinate position.
* @return StrColumn
*/
public StrColumn getAuthAsymId() {
return delegate.getColumn("auth_asym_id", DelegatingStrColumn::new);
}
/**
* The Cartesian X component corresponding to this coordinate position.
* @return FloatColumn
*/
public FloatColumn getCartnX() {
return delegate.getColumn("Cartn_x", DelegatingFloatColumn::new);
}
/**
* The Cartesian Y component corresponding to this coordinate position.
* @return FloatColumn
*/
public FloatColumn getCartnY() {
return delegate.getColumn("Cartn_y", DelegatingFloatColumn::new);
}
/**
* The Cartesian Z component corresponding to this coordinate position.
* @return FloatColumn
*/
public FloatColumn getCartnZ() {
return delegate.getColumn("Cartn_z", DelegatingFloatColumn::new);
}
/**
* The fraction of the atom type present at this site.
* The sum of the occupancies of all the atom types at this site
* may not significantly exceed 1.0 unless it is a dummy site.
* @return FloatColumn
*/
public FloatColumn getOccupancy() {
return delegate.getColumn("occupancy", DelegatingFloatColumn::new);
}
/**
* The isotropic temperature factor corresponding to this coordinate position.
* @return FloatColumn
*/
public FloatColumn getBIsoOrEquiv() {
return delegate.getColumn("B_iso_or_equiv", DelegatingFloatColumn::new);
}
/**
* The formal charge corresponding to this coordinate position.
* @return IntColumn
*/
public IntColumn getFormalCharge() {
return delegate.getColumn("formal_charge", DelegatingIntColumn::new);
}
/**
* The PDB model number.
* @return IntColumn
*/
public IntColumn getPdbModelNum() {
return delegate.getColumn("pdb_model_num", DelegatingIntColumn::new);
}
}