org.rcsb.cif.schema.mm.PdbxCrystalAlignment Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data in the PDBX_CRYSTAL_ALIGNMENT are produced by log files from
* programs during indexing
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxCrystalAlignment extends DelegatingCategory {
public PdbxCrystalAlignment(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "crystal_id":
return getCrystalId();
case "oscillation_range":
return getOscillationRange();
case "oscillation_start":
return getOscillationStart();
case "oscillation_end":
return getOscillationEnd();
case "xbeam":
return getXbeam();
case "xbeam_esd":
return getXbeamEsd();
case "ybeam":
return getYbeam();
case "ybeam_esd":
return getYbeamEsd();
case "crysx_spindle":
return getCrysxSpindle();
case "crysx_spindle_esd":
return getCrysxSpindleEsd();
case "crysy_vertical":
return getCrysyVertical();
case "crysy_vertical_esd":
return getCrysyVerticalEsd();
case "crysz_beam":
return getCryszBeam();
case "crysz_beam_esd":
return getCryszBeamEsd();
case "crystal_to_detector_distance":
return getCrystalToDetectorDistance();
case "crystal_to_detector_distance_esd":
return getCrystalToDetectorDistanceEsd();
case "crossfire_x":
return getCrossfireX();
case "crossfire_x_esd":
return getCrossfireXEsd();
case "crossfire_y":
return getCrossfireY();
case "crossfire_y_esd":
return getCrossfireYEsd();
case "crossfire_xy":
return getCrossfireXy();
case "crossfire_xy_esd":
return getCrossfireXyEsd();
case "overall_beam_divergence":
return getOverallBeamDivergence();
case "overall_beam_divergence_esd":
return getOverallBeamDivergenceEsd();
default:
return new DelegatingColumn(column);
}
}
/**
* The identifer of the crystal.
* @return StrColumn
*/
public StrColumn getCrystalId() {
return delegate.getColumn("crystal_id", DelegatingStrColumn::new);
}
/**
* The actual oscillation angle (normally <1.0 degree).
* @return FloatColumn
*/
public FloatColumn getOscillationRange() {
return delegate.getColumn("oscillation_range", DelegatingFloatColumn::new);
}
/**
* Starting oscillation angle (in degrees) .
* @return FloatColumn
*/
public FloatColumn getOscillationStart() {
return delegate.getColumn("oscillation_start", DelegatingFloatColumn::new);
}
/**
* Ending oscillation angle (in degrees) (default end = start + range).
* @return FloatColumn
*/
public FloatColumn getOscillationEnd() {
return delegate.getColumn("oscillation_end", DelegatingFloatColumn::new);
}
/**
* Distance (mm) from the edge of data to beam spot (in X direction).
* @return FloatColumn
*/
public FloatColumn getXbeam() {
return delegate.getColumn("xbeam", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of xbeam (mm).
* @return FloatColumn
*/
public FloatColumn getXbeamEsd() {
return delegate.getColumn("xbeam_esd", DelegatingFloatColumn::new);
}
/**
* Distance from (mm) the edge of data to beam spot (in Y direction).
* @return FloatColumn
*/
public FloatColumn getYbeam() {
return delegate.getColumn("ybeam", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of ybeam (mm).
* @return FloatColumn
*/
public FloatColumn getYbeamEsd() {
return delegate.getColumn("ybeam_esd", DelegatingFloatColumn::new);
}
/**
* Crystal mis-orientation angle (in degree) on x axis (spindle).
* @return FloatColumn
*/
public FloatColumn getCrysxSpindle() {
return delegate.getColumn("crysx_spindle", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of orientation angle (in degree) on x axis.
* @return FloatColumn
*/
public FloatColumn getCrysxSpindleEsd() {
return delegate.getColumn("crysx_spindle_esd", DelegatingFloatColumn::new);
}
/**
* Crystal mis-orientation angle (in degree) on y axis (vertical).
* @return FloatColumn
*/
public FloatColumn getCrysyVertical() {
return delegate.getColumn("crysy_vertical", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of orientation angle (in degree) on y axis.
* @return FloatColumn
*/
public FloatColumn getCrysyVerticalEsd() {
return delegate.getColumn("crysy_vertical_esd", DelegatingFloatColumn::new);
}
/**
* Crystal mis-orientation angle (in degree) on z axis (in beam).
* @return FloatColumn
*/
public FloatColumn getCryszBeam() {
return delegate.getColumn("crysz_beam", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of orientation angle (in degree) on yzaxis.
* @return FloatColumn
*/
public FloatColumn getCryszBeamEsd() {
return delegate.getColumn("crysz_beam_esd", DelegatingFloatColumn::new);
}
/**
* Distance (mm) from crystal to detector.
* @return FloatColumn
*/
public FloatColumn getCrystalToDetectorDistance() {
return delegate.getColumn("crystal_to_detector_distance", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of distance (mm) from crystal to detector.
* @return FloatColumn
*/
public FloatColumn getCrystalToDetectorDistanceEsd() {
return delegate.getColumn("crystal_to_detector_distance_esd", DelegatingFloatColumn::new);
}
/**
* Angular spread (in degrees) of incident X-ray along the
* horizontal (x) direction. Default is 0.
* @return FloatColumn
*/
public FloatColumn getCrossfireX() {
return delegate.getColumn("crossfire_x", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of angular spread (in degrees) of
* incident X-ray along the horizontal (x) direction.
* @return FloatColumn
*/
public FloatColumn getCrossfireXEsd() {
return delegate.getColumn("crossfire_x_esd", DelegatingFloatColumn::new);
}
/**
* Angular spread (in degrees) of incident X-ray along the
* vertical (y) direction. Default is 0.
* @return FloatColumn
*/
public FloatColumn getCrossfireY() {
return delegate.getColumn("crossfire_y", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of angular spread (in degrees) of
* incident X-ray along the vertical (y) direction.
* @return FloatColumn
*/
public FloatColumn getCrossfireYEsd() {
return delegate.getColumn("crossfire_y_esd", DelegatingFloatColumn::new);
}
/**
* Correlated xy component of the beam spread. This tends to be
* zero within error (in degrees^2).
* @return FloatColumn
*/
public FloatColumn getCrossfireXy() {
return delegate.getColumn("crossfire_xy", DelegatingFloatColumn::new);
}
/**
* The estimated deviation of correlated xy component of the beam
* spread (in degrees^2).
* @return FloatColumn
*/
public FloatColumn getCrossfireXyEsd() {
return delegate.getColumn("crossfire_xy_esd", DelegatingFloatColumn::new);
}
/**
* Isotropic distribution of photon angles from the source impacting on the
* crystal in degrees. Note this is typically a derived quantity, inferred
* from measuring the radial profile of the measured reflections, and it may
* be convolved with effects from the bandpass.
* @return FloatColumn
*/
public FloatColumn getOverallBeamDivergence() {
return delegate.getColumn("overall_beam_divergence", DelegatingFloatColumn::new);
}
/**
* The uncertainty in the beam divergence estimate.
* @return FloatColumn
*/
public FloatColumn getOverallBeamDivergenceEsd() {
return delegate.getColumn("overall_beam_divergence_esd", DelegatingFloatColumn::new);
}
}