org.rcsb.cif.schema.mm.PdbxEntitySrcGenProdDigest Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* This category contains details for the DIGEST steps used in
* the overall protein production process. The digestion is assumed
* to be applied to the result of the previous production step, or the
* gene source if this is the first production step.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxEntitySrcGenProdDigest extends DelegatingCategory {
public PdbxEntitySrcGenProdDigest(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "entry_id":
return getEntryId();
case "entity_id":
return getEntityId();
case "step_id":
return getStepId();
case "next_step_id":
return getNextStepId();
case "end_construct_id":
return getEndConstructId();
case "robot_id":
return getRobotId();
case "date":
return getDate();
case "restriction_enzyme_1":
return getRestrictionEnzyme1();
case "restriction_enzyme_2":
return getRestrictionEnzyme2();
case "purification_details":
return getPurificationDetails();
case "summary":
return getSummary();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_entity_src_gen_prod_digest.entry_id uniquely identifies
* a sample consisting of one or more proteins whose structure is
* to be determined. This is a pointer to _entry.id. This item may
* be a site dependent bar code.
* @return StrColumn
*/
public StrColumn getEntryId() {
return delegate.getColumn("entry_id", DelegatingStrColumn::new);
}
/**
* The value of _pdbx_entity_src_gen_prod_digest.entity_id uniquely identifies
* each protein contained in the project target protein complex whose
* structure is to be determined. This data item is a pointer to _entity.id
* in the ENTITY category. This item may be a site dependent bar code.
* @return StrColumn
*/
public StrColumn getEntityId() {
return delegate.getColumn("entity_id", DelegatingStrColumn::new);
}
/**
* This item is the unique identifier for this digestion step.
* @return IntColumn
*/
public IntColumn getStepId() {
return delegate.getColumn("step_id", DelegatingIntColumn::new);
}
/**
* This item unique identifier for the next production step. This allows
* a workflow to have multiple entry points leading to a single product.
* @return IntColumn
*/
public IntColumn getNextStepId() {
return delegate.getColumn("next_step_id", DelegatingIntColumn::new);
}
/**
* This item is a pointer to pdbx_construct.id in the
* PDBX_CONSTRUCT category. The referenced nucleic acid sequence
* is that of the digest product
* @return StrColumn
*/
public StrColumn getEndConstructId() {
return delegate.getColumn("end_construct_id", DelegatingStrColumn::new);
}
/**
* This data item is a pointer to pdbx_robot_system.id
* in the PDBX_ROBOT_SYSTEM category.
* @return StrColumn
*/
public StrColumn getRobotId() {
return delegate.getColumn("robot_id", DelegatingStrColumn::new);
}
/**
* The date of this production step.
* @return StrColumn
*/
public StrColumn getDate() {
return delegate.getColumn("date", DelegatingStrColumn::new);
}
/**
* The first enzyme used in the restriction digestion. The sites at
* which this cuts can be derived from the sequence.
* @return StrColumn
*/
public StrColumn getRestrictionEnzyme1() {
return delegate.getColumn("restriction_enzyme_1", DelegatingStrColumn::new);
}
/**
* The second enzyme used in the restriction digestion. The sites at
* which this cuts can be derived from the sequence.
* @return StrColumn
*/
public StrColumn getRestrictionEnzyme2() {
return delegate.getColumn("restriction_enzyme_2", DelegatingStrColumn::new);
}
/**
* String value containing details of any purification of the
* product of the digestion.
* @return StrColumn
*/
public StrColumn getPurificationDetails() {
return delegate.getColumn("purification_details", DelegatingStrColumn::new);
}
/**
* Summary of the details of restriction digestion any purification of the
* product of the digestion.
* @return StrColumn
*/
public StrColumn getSummary() {
return delegate.getColumn("summary", DelegatingStrColumn::new);
}
}