org.rcsb.cif.schema.mm.PdbxLinkedEntityLinkList Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the PDBX_LINKED_ENTITY_LINK_LIST category give details about
* the linkages with molecules represented as linked entities.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxLinkedEntityLinkList extends DelegatingCategory {
public PdbxLinkedEntityLinkList(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "link_id":
return getLinkId();
case "linked_entity_id":
return getLinkedEntityId();
case "details":
return getDetails();
case "entity_id_1":
return getEntityId1();
case "entity_id_2":
return getEntityId2();
case "entity_seq_num_1":
return getEntitySeqNum1();
case "entity_seq_num_2":
return getEntitySeqNum2();
case "comp_id_1":
return getCompId1();
case "comp_id_2":
return getCompId2();
case "atom_id_1":
return getAtomId1();
case "atom_id_2":
return getAtomId2();
case "value_order":
return getValueOrder();
case "component_1":
return getComponent1();
case "component_2":
return getComponent2();
case "link_class":
return getLinkClass();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_linked_entity_link_list.link_id uniquely identifies
* linkages between entities with a molecule.
* @return IntColumn
*/
public IntColumn getLinkId() {
return delegate.getColumn("link_id", DelegatingIntColumn::new);
}
/**
* The value of _pdbx_linked_entity_link_list.linked_entity_id is a reference
* _pdbx_linked_entity_list.linked_entity_id in the PDBX_LINKED_ENTITY_LIST category.
* @return StrColumn
*/
public StrColumn getLinkedEntityId() {
return delegate.getColumn("linked_entity_id", DelegatingStrColumn::new);
}
/**
* A description of special aspects of a linkage between
* these entities in this molecule.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The entity id of the first of the two entities joined by the
* linkage.
*
* This data item is a pointer to _pdbx_linked_entity_list.entity_id
* in the PDBX_LINKED_ENTITY_LIST category.
* @return StrColumn
*/
public StrColumn getEntityId1() {
return delegate.getColumn("entity_id_1", DelegatingStrColumn::new);
}
/**
* The entity id of the second of the two entities joined by the
* linkage.
*
* This data item is a pointer to _pdbx_linked_entity_list.entity_id
* in the PDBX_LINKED_ENTITY_LIST category.
* @return StrColumn
*/
public StrColumn getEntityId2() {
return delegate.getColumn("entity_id_2", DelegatingStrColumn::new);
}
/**
* For a polymer entity, the sequence number in the first of
* the two entities containing the linkage.
*
* This data item is a pointer to _entity_poly_seq.num
* in the ENTITY_POLY_SEQ category.
* @return IntColumn
*/
public IntColumn getEntitySeqNum1() {
return delegate.getColumn("entity_seq_num_1", DelegatingIntColumn::new);
}
/**
* For a polymer entity, the sequence number in the second of
* the two entities containing the linkage.
*
* This data item is a pointer to _entity_poly_seq.num
* in the ENTITY_POLY_SEQ category.
* @return IntColumn
*/
public IntColumn getEntitySeqNum2() {
return delegate.getColumn("entity_seq_num_2", DelegatingIntColumn::new);
}
/**
* The component identifier in the first of the two entities containing the linkage.
*
* For polymer entities, this data item is a pointer to _entity_poly_seq.mon_id
* in the ENTITY_POLY_SEQ category.
*
* For non-polymer entities, this data item is a pointer to
* _chem_comp.id in the CHEM_COMP category.
* @return StrColumn
*/
public StrColumn getCompId1() {
return delegate.getColumn("comp_id_1", DelegatingStrColumn::new);
}
/**
* The component identifier in the second of the two entities containing the linkage.
*
* For polymer entities, this data item is a pointer to _entity_poly_seq.mon_id
* in the ENTITY_POLY_SEQ category.
*
* For non-polymer entities, this data item is a pointer to
* _chem_comp.id in the CHEM_COMP category.
* @return StrColumn
*/
public StrColumn getCompId2() {
return delegate.getColumn("comp_id_2", DelegatingStrColumn::new);
}
/**
* The atom identifier/name in the first of the two entities containing the linkage.
* @return StrColumn
*/
public StrColumn getAtomId1() {
return delegate.getColumn("atom_id_1", DelegatingStrColumn::new);
}
/**
* The atom identifier/name in the second of the two entities containing the linkage.
* @return StrColumn
*/
public StrColumn getAtomId2() {
return delegate.getColumn("atom_id_2", DelegatingStrColumn::new);
}
/**
* The bond order target for the chemical linkage.
* @return StrColumn
*/
public StrColumn getValueOrder() {
return delegate.getColumn("value_order", DelegatingStrColumn::new);
}
/**
* The entity component identifier for the first of two entities containing the linkage.
* @return IntColumn
*/
public IntColumn getComponent1() {
return delegate.getColumn("component_1", DelegatingIntColumn::new);
}
/**
* The entity component identifier for the second of two entities containing the linkage.
* @return IntColumn
*/
public IntColumn getComponent2() {
return delegate.getColumn("component_2", DelegatingIntColumn::new);
}
/**
* A code indicating the entity types involved in the linkage.
* @return StrColumn
*/
public StrColumn getLinkClass() {
return delegate.getColumn("link_class", DelegatingStrColumn::new);
}
}