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package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the REFINE_TLS category record details about
* TLS parameters used in structure refinement. Note that the
* intention is primarily to describe directly refined TLS
* parameters, although other methods of obtaining TLS parameters
* may be covered, see item _pdbx_refine_tls.method
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxRefineTls extends DelegatingCategory {
public PdbxRefineTls(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "id":
return getId();
case "pdbx_refine_id":
return getPdbxRefineId();
case "details":
return getDetails();
case "method":
return getMethod();
case "origin_x":
return getOriginX();
case "origin_y":
return getOriginY();
case "origin_z":
return getOriginZ();
case "T[1][1]":
return getT11();
case "T[1][1]_esd":
return getT11Esd();
case "T[1][2]":
return getT12();
case "T[1][2]_esd":
return getT12Esd();
case "T[1][3]":
return getT13();
case "T[1][3]_esd":
return getT13Esd();
case "T[2][2]":
return getT22();
case "T[2][2]_esd":
return getT22Esd();
case "T[2][3]":
return getT23();
case "T[2][3]_esd":
return getT23Esd();
case "T[3][3]":
return getT33();
case "T[3][3]_esd":
return getT33Esd();
case "L[1][1]":
return getL11();
case "L[1][1]_esd":
return getL11Esd();
case "L[1][2]":
return getL12();
case "L[1][2]_esd":
return getL12Esd();
case "L[1][3]":
return getL13();
case "L[1][3]_esd":
return getL13Esd();
case "L[2][2]":
return getL22();
case "L[2][2]_esd":
return getL22Esd();
case "L[2][3]":
return getL23();
case "L[2][3]_esd":
return getL23Esd();
case "L[3][3]":
return getL33();
case "L[3][3]_esd":
return getL33Esd();
case "S[1][1]":
return getS11();
case "S[1][1]_esd":
return getS11Esd();
case "S[1][2]":
return getS12();
case "S[1][2]_esd":
return getS12Esd();
case "S[1][3]":
return getS13();
case "S[1][3]_esd":
return getS13Esd();
case "S[2][1]":
return getS21();
case "S[2][1]_esd":
return getS21Esd();
case "S[2][2]":
return getS22();
case "S[2][2]_esd":
return getS22Esd();
case "S[2][3]":
return getS23();
case "S[2][3]_esd":
return getS23Esd();
case "S[3][1]":
return getS31();
case "S[3][1]_esd":
return getS31Esd();
case "S[3][2]":
return getS32();
case "S[3][2]_esd":
return getS32Esd();
case "S[3][3]":
return getS33();
case "S[3][3]_esd":
return getS33Esd();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_refine_tls.id must uniquely identify a record in
* the PDBX_REFINE_TLS list.
* Note that this item need not be a number; it can be any unique
* identifier.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* This data item uniquely identifies a refinement within an entry.
* _pdbx_refine_tls.pdbx_refine_id can be used to distinguish the results
* of joint refinements.
* @return StrColumn
*/
public StrColumn getPdbxRefineId() {
return delegate.getColumn("pdbx_refine_id", DelegatingStrColumn::new);
}
/**
* A description of the TLS group, such as a domain name or a
* chemical group name.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The method by which the TLS parameters were obtained.
* @return StrColumn
*/
public StrColumn getMethod() {
return delegate.getColumn("method", DelegatingStrColumn::new);
}
/**
* The x coordinate in angstroms of the origin to which the
* TLS parameters are referred, specified according to
* a set of orthogonal Cartesian axes related to the cell axes as
* given in _atom_sites.Cartn_transform_axes.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getOriginX() {
return delegate.getColumn("origin_x", DelegatingFloatColumn::new);
}
/**
* The y coordinate in angstroms of the origin to which the
* TLS parameters are referred, specified according to
* a set of orthogonal Cartesian axes related to the cell axes as
* given in _atom_sites.Cartn_transform_axes.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getOriginY() {
return delegate.getColumn("origin_y", DelegatingFloatColumn::new);
}
/**
* The z coordinate in angstroms of the origin to which the
* TLS parameters are referred, specified according to
* a set of orthogonal Cartesian axes related to the cell axes as
* given in _atom_sites.Cartn_transform_axes.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getOriginZ() {
return delegate.getColumn("origin_z", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT11() {
return delegate.getColumn("T[1][1]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT11Esd() {
return delegate.getColumn("T[1][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT12() {
return delegate.getColumn("T[1][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT12Esd() {
return delegate.getColumn("T[1][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT13() {
return delegate.getColumn("T[1][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT13Esd() {
return delegate.getColumn("T[1][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT22() {
return delegate.getColumn("T[2][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT22Esd() {
return delegate.getColumn("T[2][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT23() {
return delegate.getColumn("T[2][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT23Esd() {
return delegate.getColumn("T[2][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the translation tensor T. This should
* be given in the same coordinate frame and units as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getT33() {
return delegate.getColumn("T[3][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.T.
* @return FloatColumn
*/
public FloatColumn getT33Esd() {
return delegate.getColumn("T[3][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL11() {
return delegate.getColumn("L[1][1]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL11Esd() {
return delegate.getColumn("L[1][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL12() {
return delegate.getColumn("L[1][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL12Esd() {
return delegate.getColumn("L[1][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL13() {
return delegate.getColumn("L[1][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL13Esd() {
return delegate.getColumn("L[1][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL22() {
return delegate.getColumn("L[2][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL22Esd() {
return delegate.getColumn("L[2][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL23() {
return delegate.getColumn("L[2][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL23Esd() {
return delegate.getColumn("L[2][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the libration tensor L. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
* @return FloatColumn
*/
public FloatColumn getL33() {
return delegate.getColumn("L[3][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.L.
* @return FloatColumn
*/
public FloatColumn getL33Esd() {
return delegate.getColumn("L[3][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* The trace of S is indeterminate by crystallography, and should
* be set to zero.
* @return FloatColumn
*/
public FloatColumn getS11() {
return delegate.getColumn("S[1][1]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS11Esd() {
return delegate.getColumn("S[1][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS12() {
return delegate.getColumn("S[1][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS12Esd() {
return delegate.getColumn("S[1][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS13() {
return delegate.getColumn("S[1][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS13Esd() {
return delegate.getColumn("S[1][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS21() {
return delegate.getColumn("S[2][1]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS21Esd() {
return delegate.getColumn("S[2][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* The trace of S is indeterminate by crystallography, and should
* be set to zero.
* @return FloatColumn
*/
public FloatColumn getS22() {
return delegate.getColumn("S[2][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS22Esd() {
return delegate.getColumn("S[2][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS23() {
return delegate.getColumn("S[2][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS23Esd() {
return delegate.getColumn("S[2][3]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS31() {
return delegate.getColumn("S[3][1]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS31Esd() {
return delegate.getColumn("S[3][1]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* If the origin is omitted, it is assumed to be the centre of
* reaction of the group, in which case S must be symmetric
* @return FloatColumn
*/
public FloatColumn getS32() {
return delegate.getColumn("S[3][2]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS32Esd() {
return delegate.getColumn("S[3][2]_esd", DelegatingFloatColumn::new);
}
/**
* The elements of the screw-rotation tensor S. This should
* be given in the same coordinate frame as the
* corresponding anisotropic displacement parameters.
*
* The trace of S is indeterminate by crystallography, and should
* be set to zero.
* @return FloatColumn
*/
public FloatColumn getS33() {
return delegate.getColumn("S[3][3]", DelegatingFloatColumn::new);
}
/**
* The estimated standard deviation of _pdbx_refine_tls.S.
* @return FloatColumn
*/
public FloatColumn getS33Esd() {
return delegate.getColumn("S[3][3]_esd", DelegatingFloatColumn::new);
}
}
