org.rcsb.cif.schema.mm.PdbxRemediationAtomSiteMapping Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the PDBX_REMEDIATION_ATOM_SITE_MAPPING category records
* mapping information between selected molecular entities that have been
* chemically redefined. The prior and current atom nomenclature is
* tabulated in this category.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxRemediationAtomSiteMapping extends DelegatingCategory {
public PdbxRemediationAtomSiteMapping(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "id":
return getId();
case "group_PDB":
return getGroupPDB();
case "label_alt_id":
return getLabelAltId();
case "label_asym_id":
return getLabelAsymId();
case "label_atom_id":
return getLabelAtomId();
case "label_comp_id":
return getLabelCompId();
case "label_seq_id":
return getLabelSeqId();
case "pdbx_align":
return getPdbxAlign();
case "PDB_ins_code":
return getPDBInsCode();
case "pre_auth_asym_id":
return getPreAuthAsymId();
case "pre_auth_atom_id":
return getPreAuthAtomId();
case "pre_auth_comp_id":
return getPreAuthCompId();
case "pre_auth_seq_id":
return getPreAuthSeqId();
case "pre_PDB_ins_code":
return getPrePDBInsCode();
case "pre_group_PDB":
return getPreGroupPDB();
case "pre_auth_alt_id":
return getPreAuthAltId();
case "pre_pdbx_align":
return getPrePdbxAlign();
case "auth_asym_id":
return getAuthAsymId();
case "auth_atom_id":
return getAuthAtomId();
case "auth_comp_id":
return getAuthCompId();
case "auth_seq_id":
return getAuthSeqId();
case "auth_alt_id":
return getAuthAltId();
case "occupancy":
return getOccupancy();
case "pre_occupancy":
return getPreOccupancy();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of pdbx_remediation_atom_site_mapping.id must uniquely identify a record in
* the PDBX_REMEDIATION_ATOM_SITE_MAPPING list.
*
* Note that this item need not be a number; it can be any unique
* identifier.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* The PDB group of atoms to which the atom site belongs.
* @return StrColumn
*/
public StrColumn getGroupPDB() {
return delegate.getColumn("group_PDB", DelegatingStrColumn::new);
}
/**
* A component of the atom_site identifier.
*
* This data item is a pointer to _atom_site.label_alt_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAltId() {
return delegate.getColumn("label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the atom_site identifier.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAsymId() {
return delegate.getColumn("label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the atom_site identifier.
*
* This data item is a pointer to _atom_site.label_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAtomId() {
return delegate.getColumn("label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the atom_site identifier.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelCompId() {
return delegate.getColumn("label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the atom_site identifier.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getLabelSeqId() {
return delegate.getColumn("label_seq_id", DelegatingIntColumn::new);
}
/**
* An optional alignment flag.
* @return IntColumn
*/
public IntColumn getPdbxAlign() {
return delegate.getColumn("pdbx_align", DelegatingIntColumn::new);
}
/**
* Optional atom_site identifier.
*
* This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPDBInsCode() {
return delegate.getColumn("PDB_ins_code", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item corresponds to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPreAuthAsymId() {
return delegate.getColumn("pre_auth_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item corrresponds to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPreAuthAtomId() {
return delegate.getColumn("pre_auth_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item corresponds to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPreAuthCompId() {
return delegate.getColumn("pre_auth_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item corresponds to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPreAuthSeqId() {
return delegate.getColumn("pre_auth_seq_id", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item corresponds to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPrePDBInsCode() {
return delegate.getColumn("pre_PDB_ins_code", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This item corresponds to the PDB group of atoms to which the atom site belongs.
* @return StrColumn
*/
public StrColumn getPreGroupPDB() {
return delegate.getColumn("pre_group_PDB", DelegatingStrColumn::new);
}
/**
* A component of the prior atom_site identifier.
*
* This data item is a pointer to _atom_site.label_alt_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPreAuthAltId() {
return delegate.getColumn("pre_auth_alt_id", DelegatingStrColumn::new);
}
/**
* An optional alignment flag.
* @return IntColumn
*/
public IntColumn getPrePdbxAlign() {
return delegate.getColumn("pre_pdbx_align", DelegatingIntColumn::new);
}
/**
* A component of the current atom_site identifier.
*
* This data item corresponds to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAsymId() {
return delegate.getColumn("auth_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the current atom_site identifier.
*
* This data item corrresponds to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAtomId() {
return delegate.getColumn("auth_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the current atom_site identifier.
*
* This data item corresponds to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthCompId() {
return delegate.getColumn("auth_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the current atom_site identifier.
*
* This data item corresponds to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthSeqId() {
return delegate.getColumn("auth_seq_id", DelegatingStrColumn::new);
}
/**
* A component of the current atom_site identifier labeling alternate locations.
* @return StrColumn
*/
public StrColumn getAuthAltId() {
return delegate.getColumn("auth_alt_id", DelegatingStrColumn::new);
}
/**
* The fraction of the atom type present at the current atom site.
* @return FloatColumn
*/
public FloatColumn getOccupancy() {
return delegate.getColumn("occupancy", DelegatingFloatColumn::new);
}
/**
* The fraction of the atom type present for the prior atom site.
* @return FloatColumn
*/
public FloatColumn getPreOccupancy() {
return delegate.getColumn("pre_occupancy", DelegatingFloatColumn::new);
}
}